| New model in OGS2.0 | DPOGS201713 |
|---|---|
| Genomic Position | scaffold1019:+ 17844-38940 |
| See gene structure | |
| CDS Length | 2325 |
| Paired RNAseq reads | 7207 |
| Single RNAseq reads | 17883 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010761 (0.0) |
| Best Drosophila hit | CG9990, isoform A (0.0) |
| Best Human hit | ATP-binding cassette sub-family A member 3 (8e-23) |
| Best NR hit (blastp) | abc transporter [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | abc transporter [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0043190 ATP-binding cassette (ABC) transporter complex GO:0005215 transporter activity GO:0042626 ATPase activity, coupled to transmembrane movement of substances GO:0005524 ATP binding GO:0006810 transport GO:0005886 plasma membrane |
| InterPro families | IPR013526 ABC-2 transporter IPR003439 ABC transporter-like IPR000412 ABC-2 IPR013525 ABC-2 type transporter IPR003593 ATPase, AAA+ type, core IPR017871 ABC transporter, conserved site |
| Orthology group | MCL10239 |
Nucleotide sequence:
ATGAATGTAATGACGTTAACACCGTTGGTGGTATTCAGGGAGACCTCGCCTTCGTCGCCG
ATGAGCGATGAGAAGGATTCAAAGATGAGCCAAATACAGTTCTCAGTGCCGGAGAAACAA
AACAATACCATGTGGCAAAAAAGGCAGCAGGCGGTGTGTGTAAGACACGCGTACAAACAC
TACGGCTCTAACAAACGACCGAATCACGTCCTAGAGAACCTTAACATGTCCGTCGCCAAG
GGAACCATATACGGTCTCCTGGGAGCTTCTGGTTGTGGGAAGACAACTCTACTGTCATGT
ATAGTTGGACGAAGAAAATTGAATCGGGGAGAGATTTGGGTCCTGGGAGGAAAACCGGGA
ACTAAAGGATCTGGTGTCCCTGGTAAGCGTGTTGGCTACATGCCGCAGGAGATCGCTCTC
TATGGAGAGTTCACCATCAAGGAGACCATGATGTACTTCGGCTGGATCTTCGGAATGGAG
ACCAAGGAGATCGTTGACCGACTCCGCTTCCTGCTAGACTTCCTCGACCTGCCCAGCGAG
AACAGAATGGTGAAGAACTTGAGTGGTGGTCAACAACGGCGCGTGTCGTTCGCTGTAGCG
CTCATGCACGACCCTGAGCTATTAATCCTGGACGAGCCGACCGTGGGAGTGGATCCTCTC
CTCCGACAGTCGATCTGGACCCACCTGGTCCGCATCACCAGTTCCGGAGATAAGACGGTC
ATCATCACAACCCATTACATAGAGGAGGCACGACAGGCGCATTGTATCGGTCTGATGCGC
AGTGGTCGCCTCCTGGCGGAGGAGTCGCCTCAGGCTTTGCTCCACATGTACAGCTGCGTC
TCTCTAGAGGACGTCTTCCTTAAACTATCACGAAGGCAGGGTCAAGCAAACCAAGTGGCC
GAGTTGAATATCTCGGGCGGAGCCCTAGGGCTGAATAAGATGTCCAAACGAGAGGAGGCG
CCGTACGCGGCCGAGGACGGGCAAGTGGTGGGACTCAACTTCCACCAGAGCAAGGAAGTC
CTCATCGTGGATGCTGCGGGCTCTAACGGAGATTTGCCCGGCAAAGTGACGGAGGTCGTT
AAGTCAGAATGCGAAGACTGCGGTAACTGTTTCAATCTGACCTCCCGCGGTAAGATCAAG
GCTCTGATACAGAAGAACTTCCTCCGGATGTGGCGTAACATCGGCGTGATGCTGTTCATC
TTCGCGCTGCCGGTGATGCAGGTCATACTGTTTTGCCTCGCTATAGGCAGGGACCCCACG
GGCCTGAGACTGGCGGTCGTCAACGACGACGTGCACGTGTTGGACGGGTACTGCCCCTTC
AACTCCTCGTGTTCCATGAAGAACCTGTCCTGCCGCTACCTCGCTCACCTCAGGAACCAG
TCCATCATCAAGGAGTACTACGCCGACCTCGGCAGCGCCCGGAGCGCCGTGGAACAGGGA
CACGCCTGGGGAGTCCTCCTGTTCAACGAGAACTACACGGACTCGCTTGTAGCTCGACTG
GCTCTAGGTGACACCGCCGATAACGACACCATCATATCCTCGGAGATCCAGGTGTGGCTG
GACATGTCCAACCAGCAGATAGGCCTCATGCTCAACAGGGACATACAGTTCAGTTACAGG
GACTTCGCCAAGGAGTTGCTCCAGACGTGCAACTACAACCCCAAGGTGGGCGACATCCCC
ATAGACTTCCAGGACCCCATCTACGGCGACAACAACCCCTCCTTCACTGACTTCGTAGCC
CCCGGCGTTATATTGACGAGCGGCTATAACCTGGCGGTGGCGTTGACGTCGTCGGCGCTG
ATCGTGGAGCGCATGGAAGGTCTCCTGGACCGGTCGTGGGTGGCGGGCGTGTCCCCCGGC
GAGATCCTGTTCAGCCACGTGGTGACGCAGTTCGTGGTGATGTGCGGCCAGACGGCGCTG
GTGCTGGTGTTCATGATCCTGGTGTTCGGCGTGGAGTGCAACGGGAACGTGCTGTACGTG
ATCGCGCTCACGCTGCTGCAGGGGCTGTGCGGGATGTGCTTCGGCTTCGTGATATCTGCG
GCCTGCGAGCTGGAGAGGAACGCCATCCAGCTGGCGCTGGGCTCGTTCTACCCGACGTTG
CTGCTGAGCGGCGTCATCTGGCCCATCGAGGGCATGCCGTGGGCGCTCCGAGGCGCGGCG
CTGTGTCTTCCGCTCACGCTGGCCACTTCCGCCCTCCGCGCCGTGTTGACGCGGGGTTGG
CCGTTGTCGGAGCCGGACGTGTACCTGGGCTTCGTGGCCACGCTGGGCTGGATCGCGCTG
TTCCTGGCGCTCACGCTCACCATACTGAGGTTCAAGAGAGGATGA
Protein sequence:
MNVMTLTPLVVFRETSPSSPMSDEKDSKMSQIQFSVPEKQNNTMWQKRQQAVCVRHAYKH
YGSNKRPNHVLENLNMSVAKGTIYGLLGASGCGKTTLLSCIVGRRKLNRGEIWVLGGKPG
TKGSGVPGKRVGYMPQEIALYGEFTIKETMMYFGWIFGMETKEIVDRLRFLLDFLDLPSE
NRMVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWTHLVRITSSGDKTV
IITTHYIEEARQAHCIGLMRSGRLLAEESPQALLHMYSCVSLEDVFLKLSRRQGQANQVA
ELNISGGALGLNKMSKREEAPYAAEDGQVVGLNFHQSKEVLIVDAAGSNGDLPGKVTEVV
KSECEDCGNCFNLTSRGKIKALIQKNFLRMWRNIGVMLFIFALPVMQVILFCLAIGRDPT
GLRLAVVNDDVHVLDGYCPFNSSCSMKNLSCRYLAHLRNQSIIKEYYADLGSARSAVEQG
HAWGVLLFNENYTDSLVARLALGDTADNDTIISSEIQVWLDMSNQQIGLMLNRDIQFSYR
DFAKELLQTCNYNPKVGDIPIDFQDPIYGDNNPSFTDFVAPGVILTSGYNLAVALTSSAL
IVERMEGLLDRSWVAGVSPGEILFSHVVTQFVVMCGQTALVLVFMILVFGVECNGNVLYV
IALTLLQGLCGMCFGFVISAACELERNAIQLALGSFYPTLLLSGVIWPIEGMPWALRGAA
LCLPLTLATSALRAVLTRGWPLSEPDVYLGFVATLGWIALFLALTLTILRFKRG