New model in OGS2.0 | DPOGS206783  |
---|---|
Genomic Position | scaffold16:- 19097-20227 |
See gene structure | |
CDS Length | 1050 |
Paired RNAseq reads   | 149 |
Single RNAseq reads   | 486 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000646 (1e-92) |
Best Drosophila hit   | TBP-associated factor 7, isoform B (2e-32) |
Best Human hit | transcription initiation factor TFIID subunit 7 (5e-26) |
Best NR hit (blastp)   | PREDICTED: similar to TBP-associated factor 7 CG2670-PA isoform 2 [Apis mellifera] (2e-88) |
Best NR hit (blastx)   | PREDICTED: similar to TBP-associated factor 7 CG2670-PA isoform 2 [Apis mellifera] (1e-60) |
GeneOntology terms    | GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0006367 transcription initiation from RNA polymerase II promoter GO:0005669 transcription factor TFIID complex GO:0016251 general RNA polymerase II transcription factor activity |
InterPro families   | IPR006751 TAFII55 protein, conserved region |
Orthology group | MCL12668 |
Nucleotide sequence:
ATGAGAAATGGTGAGGTACGTTTTGACCATTGGTTAATGCACGCAAAAATTGTAGACTTA
CCAACTATTATCGAGTCATTGAAGACAATTGACAACAAAAGTTTCTATAAAACAGCCGAT
ATATGTCAGATGATGATATGTAAAGAGGAAGCCGATCAAACACCTGCAGAAGAAGAATCA
CCTTCAAAAAATAAAAAAAAGGATCCCTATAAAGTTGATAAGAAATTTCTTTGGCCGCAT
GGTGTGACACCGCCGACCAAAAATGTAAGAAAGCGTCGCTTTCGCAAAACTTTAAAGAAA
AAATATGTAGAAGCACCTGAAATTGAAAAAGAAGTAAAAAGATTGTTAAGAGCTGATAAT
GAAGCCGTCAGTGTCACTTGGGAAGTTGTGAAAGAAGAGGATGATCAACTTAAGCCAGAA
CCTGTTACCCCAACACCAACACCAAAAGCAGAGAAAAAGACCAAAGCAGCTGAGAGAGCA
GCAAAGAAAGCCGCCAGTGCCAATAACTCTGAGTCTTCTAATGTTGTTGATATATTTGGT
AGTGCTGTAAGTGACAGTGATGCAGAAGATGACAACATTAATGTAGAGTTGGAGGATAGT
CACTTCTCAACTTATGACAGCCGCCTATCAGACAACAGTTCAGTTTTAGGCTTGGGAGAT
ATGCAAACAAAAAAAGAAAGCTATCCAATAGAATTTGATTCGCAAATGTTTCAAAGTGGT
CAAAGCCATAAAAGATCTAATAGAAGCCGAGCCACAACTCCAGCAACTTCAACAGTTACC
AAGAGCGGAGGGTTGTCGTCTGAAGAAGATGGAGAATATTCAAGAGATATGTCTAAAGAT
AATATGTCAGTGAGAATTGAGGAACTCCGAACTGAACTAGAAGAGTTGAAACAGCGCAAA
CAGAGGATGCAGTATGAAATTGCTGGAATGGAAAATCTAGCTTTACGACAAAGATTTCAA
GAGATTCTACATACATTAAACCAGGATGTTATGTATAAGGAAATGGAATATCAAGGCCTC
ATCACATTACAAAATTCTGAAGATATATGA
Protein sequence:
MRNGEVRFDHWLMHAKIVDLPTIIESLKTIDNKSFYKTADICQMMICKEEADQTPAEEES
PSKNKKKDPYKVDKKFLWPHGVTPPTKNVRKRRFRKTLKKKYVEAPEIEKEVKRLLRADN
EAVSVTWEVVKEEDDQLKPEPVTPTPTPKAEKKTKAAERAAKKAASANNSESSNVVDIFG
SAVSDSDAEDDNINVELEDSHFSTYDSRLSDNSSVLGLGDMQTKKESYPIEFDSQMFQSG
QSHKRSNRSRATTPATSTVTKSGGLSSEEDGEYSRDMSKDNMSVRIEELRTELEELKQRK
QRMQYEIAGMENLALRQRFQEILHTLNQDVMYKEMEYQGLITLQNSEDI