| New model in OGS2.0 | DPOGS207197 |
|---|---|
| Genomic Position | scaffold16:+ 239849-262935 |
| See gene structure | |
| CDS Length | 2535 |
| Paired RNAseq reads | 1046 |
| Single RNAseq reads | 2701 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000657 (5e-116) |
| Best Drosophila hit | germ cell-expressed bHLH-PAS (1e-55) |
| Best Human hit | neuronal PAS domain-containing protein 2 (2e-14) |
| Best NR hit (blastp) | methoprene-tolerant homolog-2 [Bombyx mori] (1e-132) |
| Best NR hit (blastx) | methoprene-tolerant homolog-2 [Bombyx mori] (9e-123) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0045449 regulation of transcription GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0004871 signal transducer activity GO:0007165 signal transduction |
| InterPro families | IPR000014 PAS IPR013655 PAS fold-3 IPR013767 PAS fold |
| Orthology group | MCL39453 |
Nucleotide sequence:
ATGCCGACAACCGGTAACATTCGATGCTATGAGGACGACAGAACTGGTGACGCTTACTAC
ATAGGCCGAGAACAAGTGGAAGAGAGCAGAAAGAGACTTGTGTCTGAAATTAAGCCCTAC
TTGGAGCAGGTCTCAGGTAAGTTGAGTCTAGTTCAGTTTAATCCCAAGAAGACCCAAGTT
TGCGCGTTTACCACTAAAAAGACACTATTTACTGTAGTTCCAACATCCCAGGACACTCCC
CTTAAGATCAAACAGATATTCGGAAATAGCATCGATCGCTCCCCAGAATTCAGCATGCAG
TTTATACAAGGACTTTTGAAAAATCTGAAAGGCTTCCTCATCACTATCACATATAAAGGA
TTAGTTGTCGTTGTGTCTCCAAATGTTCAAGAATACCTAGGATATTCCGAGGTTGAACTT
CTTGGTCAAAATATTTTAAATATCATCCATGAAGACGACCATCAACTCTTAAGAGAACAG
ATTTACCCTAGAAGTTGCACTCTAGGATCAAACGGGGAATTATTACTACCAAGGGAATCA
GAAGCTGAGAAAAAGGTTATGAAAAGCTTGATTAATGAAAAACGCAATTTCATTTTAAGG
TTCAAAAAAATGACACAGCAGCGTTCTAATCCGCCTGAATACATCACATGTCACGTGGAA
GGGTCTTTAAGAAAATCAGATCGAGCCGGGGTTTATTTTGACAGCATTGTTCACATCGGT
CGTCGGGTTCGGGCAAGAGGAGAAAATCCATTCGCTAGTGGAAATGATGTAGTATTCATT
GGCATGGTAAGACCTACAACAGAGACTTTTATAACAGAGAGTGGTCTCGAGTCTTTTAAG
ATGGAGTATCGAACTCGACATTCTATAGATGGCGAGATAATACAGTGTGAGCAACGCATT
GCTCTTGTCACAGGCTACATGACTCATGAAGTGAATGGAGTTAATGCAATGAACTTTATG
CATAGAGATGACGTTCGCTGGGTGATCATCGCATTAAGGGAAATGTACGACAAACATCGC
TTGGTCGGTGAATCATGCTATCGATTGATGACAAAAAATGGTCAGTTCATATATATGAGA
ACCCTTGGCCATCTAGATGTAGACCAAAACTCCAAAGAAGTAACCAGCTTCGTATGCACG
AACACTGTTGTCGCGGAGCACGAAGGCAAGAAACTTATAAAATTGATGAAGAAGAAGTTC
ACTCTAATGATCAATAACAACGAAGCTGTTAAAGACCTTGAAGACTCCGAGGTTAATGAT
AAAAAAAATCTACCTGTAGAAGATCCTAGACAACTTGAAAAAGTTATATTGCATCTGGTG
ACAAATTTACCGTCGTTTAAATCAGGTGATATTTTTCAACAGTCAACATATAATGGTGAA
ATATCTCCTCCAGAATTAGCTATCATACCCCCAAGGAAAGAAAAAATTCAAAAGGCAATT
GAGAGAAGTTACAGCCTTATTAAAAATCTTCGAGACTCTGAGTCATCCAAAAAACAGTCC
CCAATGTTTAATCACCATCAATCAAACGAACCGTTAGAACCGAAAGAACCAATGAAACTT
ATGGACACATTGGAACACCTGGAATCTCTTGAACTAAAAGAGCCACTTAGAGAAGAAACT
CATACATCAGCTTTTGTCCCAGTTTCAACAAAATGTAATAGTTTAGTTTTATATCGTCCG
AATCCTTCAAATGCATTTGCATCCAGAAATCATCCGAGTGTTCAAGAAAATAATAATTTA
CAATTTCCAAATGTAAGTGAAATAGAGAAGACTCTCCCAATGGAATATATAGCTTACCCC
GGTGCACCACATGGTTACAAATCACACAACATCCCAACACGAGTGGTTTCAGCCCCAATT
CCAACACCAGAGTCAAGTTTTATGCCTATTCCAGAAACTGTAATAGGAATGACTACCAAA
ACTGACCCAGAACCGTTGAGAATGACTCCAGAACTATCACCCGTCATCTCTCCTGATTTT
GATCTTGACTATGAAGCTACTCAAAAAATTCTTGAAGATTTCTTTGAACTCGAAAAAAAA
GAGGGGAGCCCTAAACCAATCCAATTTGTCAAAAGCCCATTTGAAAATCTTTTTCCACCT
GTCGGTCCTAATGGCGACAACCAAGCTTTTAATTGTTTCGGCGAACCAACGCCAAGCACA
TCGGGAATTAAACGACACTTTGAGGATTTCGATGACGATACAAACTTGGATGATTCTAGT
TTGTCTGAAACATTCAAAACACCACGTCAACCAAAAAAGTATCAAACAAAAAAACTTAAA
AGATCCCAAACTAGTGCGGAATATGAAATTGAGAAACTTATTTCACGCTTAAATAAAATT
ACTGATAATCGTCTTTTAGAACAAGCGACGTCTTTTAGCAAATTTTGGAAGAATAAAAAA
TTATTCTCGATAATACGAGATGTTGAAAGATCTCGTGGTATCCGGATAAGAAATTGCAAT
AAAACTATCGGCGAAACTCAGTACAGTGATAACTCTGAGAAAGAAGATGGAAGTATTGAT
GGTTACATTTGCTAA
Protein sequence:
MPTTGNIRCYEDDRTGDAYYIGREQVEESRKRLVSEIKPYLEQVSGKLSLVQFNPKKTQV
CAFTTKKTLFTVVPTSQDTPLKIKQIFGNSIDRSPEFSMQFIQGLLKNLKGFLITITYKG
LVVVVSPNVQEYLGYSEVELLGQNILNIIHEDDHQLLREQIYPRSCTLGSNGELLLPRES
EAEKKVMKSLINEKRNFILRFKKMTQQRSNPPEYITCHVEGSLRKSDRAGVYFDSIVHIG
RRVRARGENPFASGNDVVFIGMVRPTTETFITESGLESFKMEYRTRHSIDGEIIQCEQRI
ALVTGYMTHEVNGVNAMNFMHRDDVRWVIIALREMYDKHRLVGESCYRLMTKNGQFIYMR
TLGHLDVDQNSKEVTSFVCTNTVVAEHEGKKLIKLMKKKFTLMINNNEAVKDLEDSEVND
KKNLPVEDPRQLEKVILHLVTNLPSFKSGDIFQQSTYNGEISPPELAIIPPRKEKIQKAI
ERSYSLIKNLRDSESSKKQSPMFNHHQSNEPLEPKEPMKLMDTLEHLESLELKEPLREET
HTSAFVPVSTKCNSLVLYRPNPSNAFASRNHPSVQENNNLQFPNVSEIEKTLPMEYIAYP
GAPHGYKSHNIPTRVVSAPIPTPESSFMPIPETVIGMTTKTDPEPLRMTPELSPVISPDF
DLDYEATQKILEDFFELEKKEGSPKPIQFVKSPFENLFPPVGPNGDNQAFNCFGEPTPST
SGIKRHFEDFDDDTNLDDSSLSETFKTPRQPKKYQTKKLKRSQTSAEYEIEKLISRLNKI
TDNRLLEQATSFSKFWKNKKLFSIIRDVERSRGIRIRNCNKTIGETQYSDNSEKEDGSID
GYIC