| New model in OGS2.0 | DPOGS207200 |
|---|---|
| Genomic Position | scaffold16:+ 287071-287913 |
| See gene structure | |
| CDS Length | 843 |
| Paired RNAseq reads | 124 |
| Single RNAseq reads | 349 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014578 (2e-29) |
| Best Drosophila hit | histone H1 (3e-21) |
| Best Human hit | histone H1.0 (6e-07) |
| Best NR hit (blastp) | hypothetical protein POPTRDRAFT_794121 [Populus trichocarpa] (1e-32) |
| Best NR hit (blastx) | histone H1 [Anthonomus grandis] (5e-24) |
| GeneOntology terms | GO:0003677 DNA binding GO:0006333 chromatin assembly or disassembly GO:0005634 nucleus |
| InterPro families | IPR005819 Histone H5 IPR005818 Histone H1/H5 IPR011991 Winged helix-turn-helix transcription repressor DNA-binding |
| Orthology group | MCL17699 |
Nucleotide sequence:
ATGGCAGATACCGCAGTAGCATCCGAAACTCCAGCTCCGGCTACACCGGCGAAGAAACCG
AAAGCGGCAGCGGCCGCAGCGGCCGCCGCCGCCGCCGCAGCGGCTGGATCGAAGAAACCT
AAGGCTAAACCTACGCATCCTAAAACCGCTGAAATGGTCAACAACGCCATTAAAGAGTTG
AAGGAGCGCAGCGGTTCATCGTTACAGGCCATCAAGAAATACATCGCCGCTCAATACAAA
GTCGATACAGAGAAATTGGCACCGTTCATAAGAAAATATCTTAAGAGCGCCGTCGAATCC
GGTGCCCTGATACAGACAAAGGGAAAGGGTGCTTCTGGTTCTTTCAAATTGGAATCTAAA
TCATCGGCAGCAAAGAAACCCTCATCGTCGGGAGGTGGCGGTAAGGCCAGCGGCGGTGGT
CCCGCCGGAGGCGGTAGGGCTGCAGCATCTTCGGCATCGGCTAAATCTAAGAAAGCCGCC
GCCACGGCATCGGCAGTGGCCGCGAAGGGAGGTAAGAAAGGCGGTACCGCAGCTTCGTCC
GCTGCGTCTTCACCATCTAAAGCTAAAGCATCGGCGGCGGCGGCTAGGGATAAGAAAGCG
GCCGCAGCCGCAGCCGCGGCTGCCAAAAAGAAGCCAGCTGCTGCTAAGAAAGGTTCCGCA
TCCGCCAACGCCTCTGCCGCATCCTCAGCGGCAGCGTCTAAGGCCAAAGGAGCAGCATCC
AAGGCCAAGAAGAGCGCCAAACCTCCCACTAAGAAACCAAAAGCCCCGAAACCGAAGAAA
GCAGCCGCCGGTACCCCGAAATCGAAACCCGCAGCTAAGAAAGCAGCAGCAGCGAAAAAG
TAA
Protein sequence:
MADTAVASETPAPATPAKKPKAAAAAAAAAAAAAAGSKKPKAKPTHPKTAEMVNNAIKEL
KERSGSSLQAIKKYIAAQYKVDTEKLAPFIRKYLKSAVESGALIQTKGKGASGSFKLESK
SSAAKKPSSSGGGGKASGGGPAGGGRAAASSASAKSKKAAATASAVAAKGGKKGGTAASS
AASSPSKAKASAAAARDKKAAAAAAAAAKKKPAAAKKGSASANASAASSAAASKAKGAAS
KAKKSAKPPTKKPKAPKPKKAAAGTPKSKPAAKKAAAAKK