| New model in OGS2.0 | DPOGS207262 |
|---|---|
| Genomic Position | scaffold76:+ 78859-81836 |
| See gene structure | |
| CDS Length | 1275 |
| Paired RNAseq reads | 822 |
| Single RNAseq reads | 1994 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012127 (0.0) |
| Best Drosophila hit | lethal (2) 09851 (4e-151) |
| Best Human hit | glutamate-rich WD repeat-containing protein 1 (2e-121) |
| Best NR hit (blastp) | PREDICTED: similar to GA11814-PA [Tribolium castaneum] (3e-169) |
| Best NR hit (blastx) | PREDICTED: similar to GA11814-PA [Tribolium castaneum] (1e-162) |
| GeneOntology terms | GO:0005634 nucleus GO:0005730 nucleolus |
| InterPro families | IPR020472 G-protein beta WD-40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup IPR022052 Histone-binding protein RBBP4 IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR019775 WD40 repeat, conserved site IPR011046 WD40 repeat-like-containing domain |
| Orthology group | MCL12066 |
Nucleotide sequence:
ATGGAAGAAGGCGACCAAACCGAAGAAGATTCACGGCCTAAGACCTATCTTCCCGACCAG
CCTTTACAAGAAGATGAGCATTTAATTTGTGATCAATCGGCTTATGTTATGTTGCACCAA
GCACAAACTGGTGCTCCATGCCTTAGTTTTGATATAATCACAGACAACCTAGGCAATGAT
CGTCAACAATTTCCCATGACAGCTTACTTGGTTGCCGGTACACAAGCCTCGAGCGCTCAC
TTAAATAATGTTTTAGTTGTAAAAATGTCAAATTTACACACCACCGCAAAACCAGAGGAT
GAAGAAGAATCCGATGAGGACGATGATGACGAAGAGGAAGATGAAGAAAAGAAACCACAA
ATGACTTTTGCATTTATTAAACACCAGGGCTGTGTGAATAGAATAAGAACCACAAACTAT
AAAAACTCAGTTTTGGCAGCAACATGGTCTGAATTAGGAAGGGTGGATGTGTGGAATATT
ACTCAGCAATTACAAGCAGTTGATGAACCAGCATTACTTGAGAGATACAATCTTGACACC
GTGTCTAATCCAGTGAAACCATTATATTCATTCAATGGACACCAACAAGAAGGATTTGGC
ATGGACTGGTGTCCAACTGAGCCAGGAGTATTAGCAACAGGTGATTGCAGAAGAGACATT
CATATATGGAAGCCGAATGAGGCTGGTACTTGGACAGTGGACCAAAGACCCTTAGTTGGA
CACACAAGTTCAGTGGAAGATATCCAATGGTCACCTAATGAAAAAAATGTCCTGGCTACC
TGCTCAGTTGATAGAACTATCAGAATATGGGACACAAGAGCACCACCACACAAAGCGTGT
ATGTTGACAGCTGAAAATGCTCACGAGAGAGATATTAATGTTATATCTTGGAATAGAAAA
GAACCATTTATAGCTAGCGGTGGCGATGATGGTTTTCTCCACATATGGGATCTCCGACAA
TTCACTCGCAGTACGCCTGTTGGTACTTTCAAACATCATACTGCGCCGATCACGTCAGTT
GAGTGGCACTGGACAGAGCCCAGTGTGCTTGCTTCAGCAGGAGAGGATAACCAAGTCGCT
CTGTGGGACCTTGCTGTTGAAAGAGATGATGAAGAAGTAGTGGAAGAAGAGTTAAAGAAT
TTACCACCACAATTGCTTTTTATTCATCAAGGACAAACAGATATTAAGGAACTTCATTGG
CACAAGCAAATTCCTGGCGTCATAGTGACAACCGCACATACAGGATTCAATATATTTAAA
ACTATAAGTGTATAA
Protein sequence:
MEEGDQTEEDSRPKTYLPDQPLQEDEHLICDQSAYVMLHQAQTGAPCLSFDIITDNLGND
RQQFPMTAYLVAGTQASSAHLNNVLVVKMSNLHTTAKPEDEEESDEDDDDEEEDEEKKPQ
MTFAFIKHQGCVNRIRTTNYKNSVLAATWSELGRVDVWNITQQLQAVDEPALLERYNLDT
VSNPVKPLYSFNGHQQEGFGMDWCPTEPGVLATGDCRRDIHIWKPNEAGTWTVDQRPLVG
HTSSVEDIQWSPNEKNVLATCSVDRTIRIWDTRAPPHKACMLTAENAHERDINVISWNRK
EPFIASGGDDGFLHIWDLRQFTRSTPVGTFKHHTAPITSVEWHWTEPSVLASAGEDNQVA
LWDLAVERDDEEVVEEELKNLPPQLLFIHQGQTDIKELHWHKQIPGVIVTTAHTGFNIFK
TISV