| New model in OGS2.0 | DPOGS212944 |
|---|---|
| Genomic Position | scaffold2460:- 21374-25490 |
| See gene structure | |
| CDS Length | 1224 |
| Paired RNAseq reads | 1225 |
| Single RNAseq reads | 2777 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001699 (8e-93) |
| Best Drosophila hit | Ran GTPase activating protein (3e-34) |
| Best Human hit | ran GTPase-activating protein 1 (5e-36) |
| Best NR hit (blastp) | PREDICTED: similar to ran gtpase-activating protein [Tribolium castaneum] (1e-60) |
| Best NR hit (blastx) | PREDICTED: similar to ran gtpase-activating protein [Tribolium castaneum] (1e-61) |
| GeneOntology terms | GO:0005515 protein binding GO:0007165 signal transduction GO:0005098 Ran GTPase activator activity GO:0005575 cellular_component |
| InterPro families | IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype IPR009109 Ran-GTPase activating protein 1, C-terminal |
| Orthology group | MCL12330 |
Nucleotide sequence:
GAACTCCGTTTGAACAACAACGGGCTGGGAATAACCGGTGGAAGGCTATTAGCGAAGGCC
CTGTCGAGTAACACGCTGAGGTTAAAAGTATTCATAGCGGGAAGGAACCGACTCGAGAAC
GACGGGGCCAAGGCTCTGGCTGCTGTTTTTCAGTCGATGGGCAGTCTTGAAGAGTTGGCT
ATGCCGCAGAACGGTATTTATCACACTGGGATAGCGGCGCTGTCGGAGTCGTTCAGACAT
TCACCGAATTTGGAGGTCATTAACCTTAATGATAACACCATAGGACCGAAGGGGGCTGCC
TCCATCGCTGCGGCGTTGCCGAGATTAAAAAAATTAAAATCAATAAATTTCGGCGACTGT
CTGTTGAAGAGCGCCGGGGCGAAGGCGCTGGCTCAGGGGATAAAGGACTACAACGTACTG
CTCGAGTCCATTGAGTTAAGCCACAATGAGATTGGTCGGGAGGCTTGCATGCAACTGGTT
GAGGCTCTGACAATACAACCGGGGGCCAAGGATAGACTGACGAGAGTTAATCTAGCCGGC
AACAGTTTGGGTGGAGCGGCCAATAAGAAAATCATGAAGGATAAGCTGGGAGCCTCCGCT
GAACTCAGCGATGGGGAAGGAAGTGACGAGGAATATGAGTCGGAGTCGGAACATTCTGAC
TACCAGTCTGGAGCGTCGGAGGACAGCGCCACGGAGGACGCCAGACACGTGGACACTAGC
CTCGAGGAGCACGAGGACCTGGACAGGACTGGCATAGAGGAAGTAGAGACGGATATTGGG
AGATTTCTCAAAGATCCAACCTTAGAGAACCTGAGCCGCCTGGGCGGTGATATAGCAGAG
GTCATTGATGCACATTTACAGAACATCAAGGACCCGGAGAGTCTCACCGTATCATATGTG
GAGGCGTTGTGTTGTGTTTGGGGAGCCAGCGAGGGCGACAGTCAGAGGAAGCTATGCCGG
ACCACCATACAGAGAGCCCCGCAGCAGTGGATACTGGCCAACAACATGCTCAGGGCACTG
CAACTCATTAAGTCTGAAAACAAGGATTACAAAATAAGATGGAAGGTGCCATCGTGTTAC
AAAGCACTCGCAAAGGAAATCGACGAGGCCTACTTCCCTCACGCCCTCAGAGACACGCTA
AAGTTCTTCATCGCCAGCAAGATGGCGTCACTTCCGCCGGAAATCAGAACAGTTGTAGAG
AAACATCCCAATTTGTACACATAA
Protein sequence:
ELRLNNNGLGITGGRLLAKALSSNTLRLKVFIAGRNRLENDGAKALAAVFQSMGSLEELA
MPQNGIYHTGIAALSESFRHSPNLEVINLNDNTIGPKGAASIAAALPRLKKLKSINFGDC
LLKSAGAKALAQGIKDYNVLLESIELSHNEIGREACMQLVEALTIQPGAKDRLTRVNLAG
NSLGGAANKKIMKDKLGASAELSDGEGSDEEYESESEHSDYQSGASEDSATEDARHVDTS
LEEHEDLDRTGIEEVETDIGRFLKDPTLENLSRLGGDIAEVIDAHLQNIKDPESLTVSYV
EALCCVWGASEGDSQRKLCRTTIQRAPQQWILANNMLRALQLIKSENKDYKIRWKVPSCY
KALAKEIDEAYFPHALRDTLKFFIASKMASLPPEIRTVVEKHPNLYT