| New model in OGS2.0 | DPOGS210928 |
|---|---|
| Genomic Position | scaffold70:+ 72978-78928 |
| See gene structure | |
| CDS Length | 669 |
| Paired RNAseq reads | 9 |
| Single RNAseq reads | 17 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003079 (1e-37) |
| Best Drosophila hit | Sox21a (1e-40) |
| Best Human hit | transcription factor SOX-21 (3e-41) |
| Best NR hit (blastp) | PREDICTED: similar to Sox21a CG7345-PA [Tribolium castaneum] (1e-57) |
| Best NR hit (blastx) | PREDICTED: similar to SRY-box 21 [Apis mellifera] (2e-47) |
| GeneOntology terms | GO:0003677 DNA binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR000910 High mobility group, HMG1/HMG2 IPR009071 High mobility group, superfamily |
| Orthology group | MCL18064 |
Nucleotide sequence:
ATGTCTCTGTCGAAGCAACCTTCGGATCATATAAAGAGGCCCATGAACGCATTCATGGTG
TGGTCCAGGGGTCAAAGGAGGAAGATGGCACAGGACAACCCGAAGATGCACAACTCAGAG
ATATCCAAGAGACTTGGAGCCGAGTGGAAGTTGCTCACTGAGATGGAGAAGAGACCGTTC
ATCGATGAGGCGAAAAGACTCAGAGCCCTCCACATGAAAGAACATCCCGATTATAAATAT
CGGCCGCGGCGGAAACCGAAGGCGTTGATCAAGAAGGAGCCCAAGTTCGGTTTCAACATC
AGCGGTCTGATGGCACCAGTTCCCCGTCTGATGACGCCCTCTATGCCGCAACCAGTACCA
CAGATGCCTGTACCACATCACTTGCTGCAGGACAAACCTGACTTGGGACGGACGCTCTTC
CCACCCATACCGTACCCATTTTACCCCTTCGCCAAGATTCCCTCCGACGATGGAAAGTTA
GCCGCAGAATTAGCGCATCTACAGGCCCTGTACGGCGGCGCGCTGTACAGCTCGGCGTTG
TACAACAGCGCCCTGTCTCCTTGCGGCTGCCCTCCTCGCCGGTCTCCGTCCCCCCCGCCG
GACGTGAAGCGCCCGGTGGCTTACGTTCTGATGAAGAGTGACGAGGAGCCTCCGCAGCAT
GTTATATGA
Protein sequence:
MSLSKQPSDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEMEKRPF
IDEAKRLRALHMKEHPDYKYRPRRKPKALIKKEPKFGFNISGLMAPVPRLMTPSMPQPVP
QMPVPHHLLQDKPDLGRTLFPPIPYPFYPFAKIPSDDGKLAAELAHLQALYGGALYSSAL
YNSALSPCGCPPRRSPSPPPDVKRPVAYVLMKSDEEPPQHVI