New model in OGS2.0 | DPOGS210932  |
---|---|
Genomic Position | scaffold70:+ 153544-159018 |
See gene structure | |
CDS Length | 1491 |
Paired RNAseq reads   | 780 |
Single RNAseq reads   | 2883 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003782 (1e-141) |
Best Drosophila hit   | CG17883, isoform A (4e-76) |
Best Human hit | TBC1 domain family member 20 (9e-57) |
Best NR hit (blastp)   | hypothetical protein AaeL_AAEL001505 [Aedes aegypti] (3e-100) |
Best NR hit (blastx)   | AGAP008312-PA [Anopheles gambiae str. PEST] (1e-96) |
GeneOntology terms    | GO:0032313 regulation of Rab GTPase activity GO:0005622 intracellular GO:0005097 Rab GTPase activator activity |
InterPro families   | IPR000195 Rab-GAP/TBC domain |
Orthology group | MCL13840 |
Nucleotide sequence:
ATGGAATCCATTAATACTGATTCAGAAAGAAGTGATAAATGTAATATAAATGGAGACTGC
TCTCCGATAACAGATAATGAAAGCAATAACTTTAATCACGCGAAAAATATTGATGATATC
TCTACACCTTCCGAGTTAAAATTTGACGAAGACTTGGAATTCGAGAGCTTCGACATAATT
GAAAAACGAAAGGATATAGAAAAGTGTCTTGCTAATCCGGACCTTGTAAATTTGGAGCAA
TGGCAGAACTTTGCTAAAAGTAAAGGGGGTTTAATTTGTGATAAATATAGAAGAAAGATA
TGGCCACTGCTAGTTGGAGTAACTCAAGAGGAATTGACTGATCCTCCGTCACTGGATGAG
CTCTCTACACACCCTGAATACAATCAAGTTGTGCTGGATGTGAACAGATCCCTCAAACGG
TTTCCACCTGGAATTCCGTACGAGCAAAGAGTAGCCCTACAGGACCAGCTTACTGTTCTT
ATACTTCGGGTGATCATTAAATATCCACACCTCAAATATTATCAGGGATACCACGACGTG
GCCATAACTCTCCTTCTAGTATGTGGAGACCGAGCCTCGTTCCCACTGCTGTGTCGCCTG
TCGTACGGCTCGGGGGCTCCGCTAGCGCCGTTCATGCAGACCACGATGCAGCCCACGCAG
CACCTCCTCAACTACATGCTGCCCATACTGCGACGAGCTGATCATGGCCTGGCTGACTGC
CTGGATAAGGCTGGTGTCGGCACGATGTTCGCTCTGCCGTGGTACTTGACGTGGTTCGGT
CACAGTCTGAACCGGTACTCGGACGTGGTGCGTCTCTACGACTACTTCCTGTGCGCTCCG
CCCCTGTTTCCGGTGTACGTGACGGCCTCCATCGTGCTGCAGAGGGCCGCTGATGTTTAT
CAGTGTGACTGCGACATGGCCATGATGCACTGCCTTCTGTCCAGGTTACCAGATGACTTA
CCATTCGAAGACATCCTGGTGACAGCTGAGAAGATATACAACGAGAACGATCCCACAGAC
CTCGAGGATGAGGTCGCCGCGCTGGAGAAACGAGAAGAGGAGCAGCGCAAGTTGGACGAG
GAGCGCATGCGGCGGCGGCAGGAGGAGCGGCGGCGGGGCGCGGGTCGGGGTGCGGCCCGG
GGCTGGTGGGTGCTCCGCCGCCCGGCCCACCGCCGCGCCGCCCTGGCGCTCACGGCGGCC
CTACTCGGGCGGCCCTGCTCGCCATCTACGTCTACTACCGGCCGGAGCTGTTCAGACAGA
CTGGCTGTTGGTTCTGTGACGTCCGCTGCATCAAGCCTACATTCAGCCCGCGGCTCGTGT
GTTGTTCCCCTGACGGTGGTGTCTGTGGTGACCTTCGCGACCCGTGCCTCATCACGTTAC
ATCCGACCGGTCGTGACGGCGCTATCCCCCGGTGAACAAAAGGTTTATGTCAATTTTAGT
TTAGTCCCTCAACTGTTTGATCCTAATCGCCGGATGGTACGATTCAAATAA
Protein sequence:
MESINTDSERSDKCNINGDCSPITDNESNNFNHAKNIDDISTPSELKFDEDLEFESFDII
EKRKDIEKCLANPDLVNLEQWQNFAKSKGGLICDKYRRKIWPLLVGVTQEELTDPPSLDE
LSTHPEYNQVVLDVNRSLKRFPPGIPYEQRVALQDQLTVLILRVIIKYPHLKYYQGYHDV
AITLLLVCGDRASFPLLCRLSYGSGAPLAPFMQTTMQPTQHLLNYMLPILRRADHGLADC
LDKAGVGTMFALPWYLTWFGHSLNRYSDVVRLYDYFLCAPPLFPVYVTASIVLQRAADVY
QCDCDMAMMHCLLSRLPDDLPFEDILVTAEKIYNENDPTDLEDEVAALEKREEEQRKLDE
ERMRRRQEERRRGAGRGAARGWWVLRRPAHRRAALALTAALLGRPCSPSTSTTGRSCSDR
LAVGSVTSAASSLHSARGSCVVPLTVVSVVTFATRASSRYIRPVVTALSPGEQKVYVNFS
LVPQLFDPNRRMVRFK