| New model in OGS2.0 | DPOGS201565 |
|---|---|
| Genomic Position | scaffold864:+ 23533-31075 |
| See gene structure | |
| CDS Length | 3081 |
| Paired RNAseq reads | 1073 |
| Single RNAseq reads | 2876 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006112 (0.0) |
| Best Drosophila hit | CG32972, isoform B (6e-106) |
| Best Human hit | transforming growth factor-beta-induced protein ig-h3 precursor (2e-14) |
| Best NR hit (blastp) | PREDICTED: similar to CG32972 CG32972-PB [Tribolium castaneum] (1e-155) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC014404 [Tribolium castaneum] (4e-150) |
| GeneOntology terms | GO:0005488 binding GO:0007155 cell adhesion |
| InterPro families | IPR000782 FAS1 domain |
| Orthology group | MCL16526 |
Nucleotide sequence:
ATGAGGGGTAGCGTTTATCAACTTTTGCTTTTGGTGCCTCTGGTCGCAGCCATTACCGGA
CCGAGGATAGAAAATGACTTCGATAGAAGCAGACAGCCGCCTCATGGACATACAGGCCTA
AATGATCAGCAGAGATTCGGGGTTTCAGCTCAGATACAGAATTTTCAGCAGCAATCTAAT
TTGTTAAGCAGTCCATCTCCACCACTTCAATTTGCTCATCCTATATTTCAGCAACAACCT
TACGTCCCTCAATTTAATAATTTGCTACCAGCTCAAAACATTCCTACCAGCCTACCAGTA
CAAAACAGTAACGGTTTTCAATTTGCCCCAACTGTAAATATACCTAACAACGCCCAACTT
AATGGTTTTCAACAAGCCAACATAGGACAAATACAGCAAAATCGACAAAATATCCAACAA
CCCATACCAACTTTGGCAGCATTTCAAAATAATGGTTTGCCCCTAACAAGTTCTCAACAA
CCTTTTCACCAAAATCCAACAATTCATAGTTCTGTAGACCTCAGTCAGCAGCGACCAAGT
CAAGGCTCTTTCTTGCCAACTTTAAATTCTGGTCAAAACCAGCAGTCATTTAATGCACCA
AATCCTATTACAATTCAAGCTGCTCCAAATTTATCACCTCAGAACGTAAACAACGCACAA
ATTCCATTCCAATCAGCAATAAACCAAGGTTCAATATATAATAACGGACAAACATTACAA
CTGCAAGAATATTACGAACAGCAATCCAAAGAAAACCTAGAAAAGCTTAAAGAACTTCAG
GAAAGGCAAAGGATCATTCAAAAACACCAGGAATTTGTTCAGAAACAACAGCAGAAGCAG
CAAGAAAAAGTGGAAAAACTGCACGAAGAATTCATAAGTAAACAAGCAACGAAAACTATA
CCGACTTATACAACGACAGAAAATTACGAAGACTACTACAAGCGCAATCAAGAAAGACGC
AGACCTTTACTGCCACATGAAACTGACCTGTTCAGGAAAGCTGTGGAACAATACGAAAAA
GAACATCCAACAACAACACAAAGCACGACGACAACATCAACGACAACGACTACAACAACA
ACAAGACCGCCGACCAGATACAGAACTCGAACACCAGGCAGAACCCGAGGCCCTCCTCAA
GATAGAAATAAGCAAAAACTTTACAATGAGATCAAAAATCTACTAGAAGAGAGTGACACC
AAAGGATTTGATGACAATTTAAGAGCTAAAAGTGTGGCATTACTCCAAAAACCTGATATC
TTGAAGCAATTGAAAGTAGCTCTAGCTGAAAATCCAGAAGATTTTAACGAAAAAAATTTT
TCATCTCGAGAAATTTCTTTGAATGGTCAGAAATTTGAAGTCATAAGAACTACAAATCCA
AACCTCATTCCTCAGGGAGCTATAGCTGCTGATAATCCTGACTTAGGCAAATTTATAACA
TCGACTAAAGAACCACAAAAAGAAAGTCATATATCTTTTGATGATCTTACAAAGGATGTT
TTACCTCCGGGAGCCAATTTTGAGTTGATTAAGCAGGCTGACAATGGCAAGTTAGAAGAG
GTACCGAACATACCCAATTCGCTACAAAATAAAAAGAAGGTTACATTTGTCTTCCTAGAA
GAACAAGATGATGGTTCATATAAAGTAAAAGGTGTTAAAGCCAATGGACAGCAAACCGAG
GAAGGTCCTGAAGTGGAAAATATTTTAAATAAAATAAAGAGAGGTGAAATACAATTGCCA
GGACCGACTAAAATATCGAACGCCGGATTTAGTACTACCACCACAGCACCGACTACACAG
TCGACTGATTATATAGCAGAATCATCACACCCTCCCTCGACTTACACAAGCTTCGTTACG
ACATCGAACTACGGAAACTCTGGTCACACCAATCCCGTACAAACAACGCCAGCACCAACT
TATAGGAGTTCTCTTACATCTATAACGAGATCTACGCCTAGTTATTCACAAACGCATCCT
CCGACCACTCGCGGAACTACCACCGAGCGTTATGTCATCAAATCGTCAACTCCTAATTAT
ATCATAAACAGGAGTAGTCACATTCATTCGTCCAGACATTCGTTTCCGAGTACAACCAGT
AAAAATACGACCCCTGTCCATAGAACAACACCCCAAGATATAGTCGTCATAGGATCAAGT
GCGGCGAGTACGGTATCCCCGAATTTCGAGGAGTCTACCCCCAATTTGAGTTATGGGAAA
GACGGCACTCCTAGTCTTATCGATATTTTAAAAGAGAATGGATTATTTGCTACCGCCAAA
TATTTAAAACAATCGGGACTGGATGCAATTTTAAATGAAACAGGACCATACACTATCTTC
GCTCCAACCGATAAGGCGTTTAGGACTTTATTGGTCCAACTTGGTGGCCCCGACAGAGCT
GAAGAGAAATTCCGTGATAATCCTCGACTACTGAGTGGGCTTCTACTCCACCACGTAATT
CCTGGTGCATTCGACATCGGCTCCTTACAAGATGAGATGACGGGCGTCTCTCTGGCTGGC
ACACAATTGCGAGTGAACCAGTACGACATGCATGACGTTGAATGGAACGAGGTTCGAGTG
ACAACCATCAACGGTGCCAGAGTACTCGAAGATAAAAAGGATATACATATTCCACAGGGG
GTAGCACATGCGGTAGATCGTGTAATGTTTCCGTTACCGGTGGGAGACCTTGTCCAAACG
CTGCAGGCTGACCGTGATCGACGATTCACCACATTCCTTAAGGCGATACAAGCGAGCGGT
TTCGCGGATACCTTAGCAGAGAGCAAGACCTATACAGTATTCGCTCCAACGGACGCGGCT
TTTGCCCGCCTTCCTGCAGCTGAACTCTCCCGGTACTCTGAACGAGCTGGTGCACGAGCA
TTAGTGGCGCGACACGTGCTGCCCGGCACGTTATACAGCGCGGGAATGAGATACTATCAA
TTGAGAAACTCTATGGAAGACGCCAAGCCTCTCACTTTGCAAAAGAGTTCAGGTCGCATC
AAAGTTAACAACGCTCAAGTAATAACCCACAATATCCCCGCAACCAACGGAGTCATACAC
GCCGTAGACACGCTGCTATAA
Protein sequence:
MRGSVYQLLLLVPLVAAITGPRIENDFDRSRQPPHGHTGLNDQQRFGVSAQIQNFQQQSN
LLSSPSPPLQFAHPIFQQQPYVPQFNNLLPAQNIPTSLPVQNSNGFQFAPTVNIPNNAQL
NGFQQANIGQIQQNRQNIQQPIPTLAAFQNNGLPLTSSQQPFHQNPTIHSSVDLSQQRPS
QGSFLPTLNSGQNQQSFNAPNPITIQAAPNLSPQNVNNAQIPFQSAINQGSIYNNGQTLQ
LQEYYEQQSKENLEKLKELQERQRIIQKHQEFVQKQQQKQQEKVEKLHEEFISKQATKTI
PTYTTTENYEDYYKRNQERRRPLLPHETDLFRKAVEQYEKEHPTTTQSTTTTSTTTTTTT
TRPPTRYRTRTPGRTRGPPQDRNKQKLYNEIKNLLEESDTKGFDDNLRAKSVALLQKPDI
LKQLKVALAENPEDFNEKNFSSREISLNGQKFEVIRTTNPNLIPQGAIAADNPDLGKFIT
STKEPQKESHISFDDLTKDVLPPGANFELIKQADNGKLEEVPNIPNSLQNKKKVTFVFLE
EQDDGSYKVKGVKANGQQTEEGPEVENILNKIKRGEIQLPGPTKISNAGFSTTTTAPTTQ
STDYIAESSHPPSTYTSFVTTSNYGNSGHTNPVQTTPAPTYRSSLTSITRSTPSYSQTHP
PTTRGTTTERYVIKSSTPNYIINRSSHIHSSRHSFPSTTSKNTTPVHRTTPQDIVVIGSS
AASTVSPNFEESTPNLSYGKDGTPSLIDILKENGLFATAKYLKQSGLDAILNETGPYTIF
APTDKAFRTLLVQLGGPDRAEEKFRDNPRLLSGLLLHHVIPGAFDIGSLQDEMTGVSLAG
TQLRVNQYDMHDVEWNEVRVTTINGARVLEDKKDIHIPQGVAHAVDRVMFPLPVGDLVQT
LQADRDRRFTTFLKAIQASGFADTLAESKTYTVFAPTDAAFARLPAAELSRYSERAGARA
LVARHVLPGTLYSAGMRYYQLRNSMEDAKPLTLQKSSGRIKVNNAQVITHNIPATNGVIH
AVDTLL