| New model in OGS2.0 | DPOGS212523 |
|---|---|
| Genomic Position | scaffold11498:+ 1345-1998 |
| See gene structure | |
| CDS Length | 654 |
| Paired RNAseq reads | 139 |
| Single RNAseq reads | 1137 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009792 (4e-15) |
| Best Drosophila hit | histone H1 (8e-08) |
| Best Human hit | ND |
| Best NR hit (blastp) | histone H1 [Bombyx mori] (8e-29) |
| Best NR hit (blastx) | histone H1 [Bombyx mori] (2e-15) |
| GeneOntology terms | GO:0005634 nucleus GO:0003677 DNA binding GO:0006333 chromatin assembly or disassembly |
| InterPro families | IPR005819 Histone H5 IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR005818 Histone H1/H5 |
| Orthology group | MCL25346 |
Nucleotide sequence:
ATGTCCGAGGAATCTGATGTTGAGATGAAATCAGCGCCCATGAGGTCCAAGAGACCACCG
GCCAGCCCGACCGCTGACACACTTAAAGAACCAAAGAGGCTAACAACCAAGGAGATGATT
AAAGAGGCCTTGACGGAACTAAGAAGCAGGAAGGGGACGTCTCTGTTCGCCATCAAGAAG
TACCTGGAGCTCAAATACAACGTGGACGTGGAGAAAATAAAACATATCATAAAAAAATAC
ATCAAAACCAGCGTCGAAGATGGGACTATAGTGCAGACTAAAGGTGTCGGTGCGTCCGGT
TCATTTAAATTAGTCGAAAAGGAAAAGAAAGACAAGAAAGAAAAGAAAGAAAAGAAAGTC
AAGAAAGAGAAAAAAGGCAAAGAGACTGAGGAAAAAGAAAATGCAGACAAAAAGATTAAG
CCGAAAACTAAGAAAGAATCCAAAGATAAAGACGATGGAGCAAAAAAAGTCAAAATAGAT
ACGAAAAAGAAAAAAGAAAAAAAAGAAACAGTCAATGGAACGGTCAAAGAGAAGAAGACC
GATAAGGTGGTGAAGACGCCAGCCAAGAAGAGAACCGCCATGATGAAGAGAAAGAGCATC
GGCTCCATCATCAAGCCGCCCAAGATGAAACCAGCTAAGGCAATTAAGGGTTAG
Protein sequence:
MSEESDVEMKSAPMRSKRPPASPTADTLKEPKRLTTKEMIKEALTELRSRKGTSLFAIKK
YLELKYNVDVEKIKHIIKKYIKTSVEDGTIVQTKGVGASGSFKLVEKEKKDKKEKKEKKV
KKEKKGKETEEKENADKKIKPKTKKESKDKDDGAKKVKIDTKKKKEKKETVNGTVKEKKT
DKVVKTPAKKRTAMMKRKSIGSIIKPPKMKPAKAIKG