| New model in OGS2.0 | DPOGS203191 |
|---|---|
| Genomic Position | scaffold5721:- 2250-8540 |
| See gene structure | |
| CDS Length | 2334 |
| Paired RNAseq reads | 3332 |
| Single RNAseq reads | 8289 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002161 (7e-79) |
| Best Drosophila hit | cul-2, isoform B (1e-155) |
| Best Human hit | cullin-2 isoform c (5e-137) |
| Best NR hit (blastp) | PREDICTED: similar to cullin isoform 1 [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to cullin isoform 1 [Nasonia vitripennis] (2e-157) |
| GeneOntology terms | GO:0000152 nuclear ubiquitin ligase complex GO:0031625 ubiquitin protein ligase binding GO:0006511 ubiquitin-dependent protein catabolic process GO:0031461 cullin-RING ubiquitin ligase complex |
| InterPro families | IPR016158 Cullin homology IPR016159 Cullin repeat-like-containing domain IPR016157 Cullin, conserved site IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR001373 Cullin, N-terminal IPR019559 Cullin protein, neddylation domain |
| Orthology group | MCL14358 |
Nucleotide sequence:
ATGATGTCATTAAAGCCTAGGAATGTTGACTTTCAAGAGACTTGGGCCACACTCAAGGAA
ACGCGCCAGTTAGTAGTGCAGCGTCATGTGTTGCAGGTGGCAGGAGTTGTAGGTCTCCGG
GCTGTGGAGCGAGCTGTGTGGAATACACGCTTTTCTGATGTCTACGCTCTGTGTGTGGCC
CATCCCGAGCCTCTGGCTGACAAACTCTACGATGAAACAAGGAAGTTTTTGGAAGAACAT
GTGGATGGTTTGCTTCAGCGGGTGAAAGGAAACTGTCAGTTGGAGAGCAGCGACTATAAT
GATGGACTCCTTAACAGGTACGTGTCCGCCTGGCGCGAGTACAGCCAGGGGGTGGGCTAC
CTCAACTCTCTGTACTCGTACCTCAACCTGCAGCACGTCAAGAGGCAGAAGGTTTCTGAT
GCTGAGATAATATACGGTTCCTCAGCGACGGTCAGCTGTCCCGAGCACGACTCGCGACAA
CTGGAGGTCGGTGAGCTGGGTCTGGTGACCTGGGAGCGCGTTCTCGTCCAGCCCCTGTCG
GGAGCGCTGTCCGCTCGCATCGTGTCAGCGCTGGAAGCCGCTCGAGACACCAACAGCACC
TCGCACGACTCACACGACGTGCTGCGAGCCGCCATACACAGCACCGTACATGTACAGTCT
TTTCGAGTCCGCGCTCCTCTGTCTCTGTACGAGCGCTTGGTGCTGGAGCCCTTCCTGGCG
GCGGCGGGGGCGCAGCACTCGCGGAGGGCGGCGAGGCTGCTGCAAGATGGCGACGTGTCG
CACTTCCTGCAGCACGCCCTGGCTGGGTTGGAGCGGGAACTGAATCTGGCGAGGAGGTTC
CTTCACACGACTTCACTAGAACCGGTCAGGGGTTGCTACGAACGGGCGTGCGTTCAGGCG
CATTTAGGAGCCCTGCATGCTGATGTGGAGCGACTGCTCAGAGAGGCCGCCGATGGAGAC
TCCGAGGCCAGGAGGCTGGATCTGAGGAGGATGTACGCCTTGCTGCGGCCACTGGGGGCG
AACGCTCTGAGGCCGTTAGTGGACGCGGCGCACCAGCAAGTGGTGAAGGATGGGATGGCG
TTGCTGGACGAAGAGCATCCCAAGGACGAGGCTCACTCCCACTTCGTGTCAGCGATGCTC
TCCCTCCACAGCAAGTACAACGCGCTGTTCGCGGACGTGTTCCAGGGCGCGCAGCCCTTC
GTGGGGGCGCTGGACAAGGCGTGTTCAGCGGTGGTGAACCGCCGCGCGCCCGGCGAGTCC
TGCGCCCGCGCGCCCGAGCTGGTCTCCCGCTACTGCGACGCTCTCCTCCGCCGCCGCGCC
GCCGAGGACGCCGACGACCGCCTCGCCGCGGCCATAGTGGTCTTCAAGTACGTCGACGAC
AAAGACGTGTTCCAGAAACACTACGCGCGGGCGCTCGCCAGGAGACTCATACACCAGCTG
TCCGCCAGCATGGAACAGGAGGAGGCGATGATAAACCGTCTGAAGGCGGCCTGCGGATAC
GAGTTCACTAACAAGCTACACCGGATGTTCACCGACGTGGCCGTGTCCGCTGACCTGAAC
GCCAAGTTCCAGCAACACTTACGGGACCACGACCTGTCCCCGGGAGCTGGGTTCTTCATC
CAGGTGTTGCAGGCGGGCGCTTGGCCGCTCGGTGGAGCCATGGCGCCGCTCGCACCCCCA
GCCCAGCTGGAACGCCCGGCGCGTTTATTCGAAGCCTTCTACAGGTCGTCCTTCAGTGGC
CGCCGTCTAGCCTGGCTTCACCACCTCTGCACAGGTGAACTGCGAGCTCGTCACGCCAGT
AGACTCTACCATTTGAGCGCCACGACTCCTCAATGCGCGCTGCTGCTGATGTTCGAGTCG
GTGGATGTTGTTTCGTCGCGAGAGGCGAGAGACGCCCTCCAGCTGTCGGGGGAGAGCTGG
ACGCGGCACCTGCGACCGCTGCTGGACGCGGGCCTGCTGATCGCCAGGTCCAACGACGAG
GACGGCGACCTGGAGCTAAACCTCAACTTCTCCTGCAAGAGGACACGCATCAGACTCACC
TGCGCCGCGGCGCCCACTAGCCAAGGTGGTAACCCTGGCTCAGCTACAGGCACCACCGAG
CCCACCCACTGCGACGACGACAGGAAAATGTACCTGCAAGCGGCGCTCGTCCGGATCATG
AAACAGAGAAAGGTCCTCCGTCACACAGAACTGATCCAAGAGGTGGTATCTCAGGCTAGA
GGGTCCTTCGCCCCGTCAGTGGCCATGATAAAGAAGTGCATCGAGGCCCTGATAGACAAA
CAGTACCTGGAGAGAGCCCCGGGCACACTAGACACATACTCATACCTAGCTTAG
Protein sequence:
MMSLKPRNVDFQETWATLKETRQLVVQRHVLQVAGVVGLRAVERAVWNTRFSDVYALCVA
HPEPLADKLYDETRKFLEEHVDGLLQRVKGNCQLESSDYNDGLLNRYVSAWREYSQGVGY
LNSLYSYLNLQHVKRQKVSDAEIIYGSSATVSCPEHDSRQLEVGELGLVTWERVLVQPLS
GALSARIVSALEAARDTNSTSHDSHDVLRAAIHSTVHVQSFRVRAPLSLYERLVLEPFLA
AAGAQHSRRAARLLQDGDVSHFLQHALAGLERELNLARRFLHTTSLEPVRGCYERACVQA
HLGALHADVERLLREAADGDSEARRLDLRRMYALLRPLGANALRPLVDAAHQQVVKDGMA
LLDEEHPKDEAHSHFVSAMLSLHSKYNALFADVFQGAQPFVGALDKACSAVVNRRAPGES
CARAPELVSRYCDALLRRRAAEDADDRLAAAIVVFKYVDDKDVFQKHYARALARRLIHQL
SASMEQEEAMINRLKAACGYEFTNKLHRMFTDVAVSADLNAKFQQHLRDHDLSPGAGFFI
QVLQAGAWPLGGAMAPLAPPAQLERPARLFEAFYRSSFSGRRLAWLHHLCTGELRARHAS
RLYHLSATTPQCALLLMFESVDVVSSREARDALQLSGESWTRHLRPLLDAGLLIARSNDE
DGDLELNLNFSCKRTRIRLTCAAAPTSQGGNPGSATGTTEPTHCDDDRKMYLQAALVRIM
KQRKVLRHTELIQEVVSQARGSFAPSVAMIKKCIEALIDKQYLERAPGTLDTYSYLA