| New model in OGS2.0 | DPOGS215076 |
|---|---|
| Genomic Position | scaffold1700:- 33037-34155 |
| See gene structure | |
| CDS Length | 978 |
| Paired RNAseq reads | 317 |
| Single RNAseq reads | 856 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007173 (5e-137) |
| Best Drosophila hit | syntaxin 18 (2e-35) |
| Best Human hit | syntaxin-18 (1e-62) |
| Best NR hit (blastp) | PREDICTED: similar to Syntaxin-18 (Growth-inhibiting gene 9 protein) [Apis mellifera] (4e-82) |
| Best NR hit (blastx) | PREDICTED: similar to Syntaxin-18 (Growth-inhibiting gene 9 protein) [Apis mellifera] (1e-79) |
| GeneOntology terms | GO:0005783 endoplasmic reticulum GO:0016021 integral to membrane GO:0016020 membrane GO:0005794 Golgi apparatus GO:0006810 transport GO:0015031 protein transport GO:0016192 vesicle-mediated transport GO:0005484 SNAP receptor activity GO:0006886 intracellular protein transport |
| InterPro families | IPR000727 Target SNARE coiled-coil domain IPR019529 SNARE-complex protein Syntaxin-18 N-terminal |
| Orthology group | MCL14915 |
Nucleotide sequence:
ATGGATATAACTCCATTATTCAAAGCTTGTATAAAAACCGTAAGAACACGGAATAAAGCT
TTTGGAATTCACAGTCCATCTAGTGAAGATAAACAACGAATACTTCGAACTAAACCGAAG
ACTGCTTTTATGATAACAGCTAAGGATATAACATTACAAATAACAAAATTACGCGACTTT
ATGCTGGAGCACAGAGAAAGATACTTAAGTTTCTTTAATAGCGTTACCGGAGATGAGATG
TCGGAGGCTGAACGAGATCAAATAGACACGGGCGCGCAAAGAATTATTAATACATGTTCA
CATCTACTTAAAGAATTCAGAAATGACAATCGTAAACTTTCTGTCTCCCAGCAGACACGA
GATTACATGGATGCAGTTATAGACCTGATAGACTCATATTTAAAATCTGTTTGCAAAATT
CACAGTGAATTAAAGGCCTTAAGAGTGAAAAGGGCACTTGACATTCGAAAATTATCTCGC
TTAGAACAGCCACAGACTAAATCAAGCATTCCAAATCCTTTTATAGATAATAAAATCATA
GAACAAGAAGAAGAGAAAGATGAAGAAAATGTAGAAGAAACAGACAATCGGAAAACAAAA
ATGGATTTATCGGAAAATGAAGTAGCTGTTATGTCTGACCAGGGAGAACTAAGTGCTGAA
GAATTACAAATGTTTGAGTCGGAGAATGTTCAATTGTTGAATGAACTGAATAGTATGACT
GAAGAAGTTCGTCAAATAGAGAGTAAAGTGCTACATATAGCAGAATTACAGGAAATATTT
ACAGAAAAGGTTTTGCAACAGGAACAAGATATCGACAGGATAGCGAATACTGTTGTTGGA
ACTACAGAAACTATGAAAGATGCCAATGAACAAATAAAACAAGCCATACAGAGGAATGCT
GGCCTTAGAGTTTACATACTTTTCTTTTTGCTTGTCATGTCATTTACATTACTGTTCTTG
GACTGGTATAATGAGTAA
Protein sequence:
MDITPLFKACIKTVRTRNKAFGIHSPSSEDKQRILRTKPKTAFMITAKDITLQITKLRDF
MLEHRERYLSFFNSVTGDEMSEAERDQIDTGAQRIINTCSHLLKEFRNDNRKLSVSQQTR
DYMDAVIDLIDSYLKSVCKIHSELKALRVKRALDIRKLSRLEQPQTKSSIPNPFIDNKII
EQEEEKDEENVEETDNRKTKMDLSENEVAVMSDQGELSAEELQMFESENVQLLNELNSMT
EEVRQIESKVLHIAELQEIFTEKVLQQEQDIDRIANTVVGTTETMKDANEQIKQAIQRNA
GLRVYILFFLLVMSFTLLFLDWYNE