| New model in OGS2.0 | DPOGS203877 |
|---|---|
| Genomic Position | scaffold20721:+ 2418-3308 |
| See gene structure | |
| CDS Length | 741 |
| Paired RNAseq reads | 37 |
| Single RNAseq reads | 129 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010185 (9e-15) |
| Best Drosophila hit | single-minded, isoform B (7e-35) |
| Best Human hit | single-minded homolog 2 long isoform (4e-39) |
| Best NR hit (blastp) | PREDICTED: similar to Single minded [Tribolium castaneum] (3e-52) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC016205 [Tribolium castaneum] (3e-48) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0007399 nervous system development GO:0003677 DNA binding GO:0007275 multicellular organismal development GO:0004871 signal transducer activity GO:0030154 cell differentiation GO:0005634 nucleus |
| InterPro families | IPR000014 PAS IPR013655 PAS fold-3 IPR001610 PAC motif |
| Orthology group | MCL10901 |
Nucleotide sequence:
AGGGTGGCGTCTCTCACCGGCTACGAGCCTCAGGACCTCATCGAGAAGACCCTGTACCAC
TACATCCACGGCACGGACGTGCTGCACATGAGATACTCGCACTGCACGCTGCTGACCAAG
GGCCAGGTGACGTCGCGCTACTACCGCTTCCTGACCAAGTCCGGCGGCTGGGTGTGGATG
CAGAGCTACGCCACCATCGTGCACAACTCCCGGTCCTCGCGCCCGCACTGCATCGTGTCC
GTCAACTACGTGCTCAGCGACGTGGAGGAGAAGAACCTCGTCCTCAACATAGAGCAGGGC
CCGCCCAAGGCGAGCCCCGAGCCGCAGCCGCCCGCCGCCAAGGCGCCGCACCCCGCGGGC
GAGGACTTCGGCGACGGCTACGGCTATCCCGAGTACAGCCTGCCGGTCATACCCTCGTAC
GACGCGCACGAGGACTACCAGAACGGCTACCAGGAGATGTTCTACGAGAACTACGCGGAA
CCGGAGGTGGTCAACTACGTCTACCCTCAGAACCAGCGGCCGTTCTCGGCGAGCTCGTCC
TCCTGCAGCTCGGTGGAGAGCTCGGAGGTCAACCAGTACAACTACACCAACCTCATCTCG
TTCTACGGACACGGCGCCCAGGGCCAGAGGCAGGCGGAGGGCTTCAGCAGCTTCGCCAAG
AACCCGAGCGCCGCGCCGGACGGGTTCGCCGGCGTCATCGTGGACAACACGCAGTTCCAC
AGCAACGAGTACGTGCACTGA
Protein sequence:
RVASLTGYEPQDLIEKTLYHYIHGTDVLHMRYSHCTLLTKGQVTSRYYRFLTKSGGWVWM
QSYATIVHNSRSSRPHCIVSVNYVLSDVEEKNLVLNIEQGPPKASPEPQPPAAKAPHPAG
EDFGDGYGYPEYSLPVIPSYDAHEDYQNGYQEMFYENYAEPEVVNYVYPQNQRPFSASSS
SCSSVESSEVNQYNYTNLISFYGHGAQGQRQAEGFSSFAKNPSAAPDGFAGVIVDNTQFH
SNEYVH