| New model in OGS2.0 | DPOGS204992 |
|---|---|
| Genomic Position | scaffold2272:- 362-3083 |
| See gene structure | |
| CDS Length | 1020 |
| Paired RNAseq reads | 647 |
| Single RNAseq reads | 2743 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010227 (2e-43) |
| Best Drosophila hit | CG6995, isoform B (4e-23) |
| Best Human hit | scaffold attachment factor B2 (2e-22) |
| Best NR hit (blastp) | scaffold attachment factor b [Aedes aegypti] (2e-37) |
| Best NR hit (blastx) | scaffold attachment factor b [Aedes aegypti] (1e-36) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0005634 nucleus GO:0045449 regulation of transcription GO:0003723 RNA binding GO:0003677 DNA binding GO:0006350 transcription GO:0003676 nucleic acid binding GO:0000166 nucleotide binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR000504 RNA recognition motif domain IPR003034 DNA-binding SAP IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL17860 |
Nucleotide sequence:
ATGTCGGACCGAAAACGTTTAATATCTGATCTTCGTGTAATAGATCTACGCGCTGAGTTA
GAAAAGCGCAATCTAGATAAAAGCGGTGTACGCGGTGTGCTCGTACAACGTTTGTCTAAG
TATTTAGAAGAGAACGGGGAAGATCCGGCTACTTTTACTTTCGAATTAGCTACAAATGAA
GTAAAGACTCCATCAAAGAAGACCAGACGCACTGAAAGTGCTGTAGAAACTGTTGAAGAA
GAAACCCCAATTATGGAAGATATGATAGTCCAAGATACAGCTGGTGAGGAAGAGGATACG
GAACAATCGGAAAATAATCAGAAAAAAAAGGCGGCGAAAGAATCTCCGAAAAAAACAGAT
GAAATGGAGGTTGACGATGATGAGAAGGTTAACCGCAAACGTGAAAGTAAAGACGAGGCT
GAAGCTAGTCAAGCAAAGAAACCCTGCTTAGAAAAGGATGTTAGAAATGAGGAAGAACAT
AAGGCAGAAAATAATACAGACGCTGAAGACAGTATCAACTTAGATTTGGGTGAAGACGAA
CTTTTGAATGAAGAGACTGACATCTCAGCTAAAAACAAGAAAGATGACGCCGCGCACGTG
GATCCTGCAGCGGCCGCGAGCGTCGAGCCGTCGCAGACTTCGGAGCCAGCTGACTCCTCA
GAATGTCAAGTAATCACCGAAGCGGCTGCCACTAGCAATGAGTCTGATAAGGTTGATAGA
GAAGACAAGGATGACAAAGAGAAAGATGGGGATGTTGACAAAAAGGAAAAGAGAGACGAA
AACAAAGAGGGTGGCGCGAGGAATTTATGGGTTAGTGGATTGTCTGGGGACACGAGAGCC
AAGGATCTGAAGCAGCTATGTAGCAAGCACGGCAAGGTGATTGGAGCCAAAGTGGTAACC
AACGCCCGTACCCCAGGATCTCGTTGCTATGGTTACGTTACTATGGCCAGCTCTCAGGAT
GCCGAAAACTGTATTAAAAATCTACATAGAACTGGTATGACTGTTACTGATTATCTCTGA
Protein sequence:
MSDRKRLISDLRVIDLRAELEKRNLDKSGVRGVLVQRLSKYLEENGEDPATFTFELATNE
VKTPSKKTRRTESAVETVEEETPIMEDMIVQDTAGEEEDTEQSENNQKKKAAKESPKKTD
EMEVDDDEKVNRKRESKDEAEASQAKKPCLEKDVRNEEEHKAENNTDAEDSINLDLGEDE
LLNEETDISAKNKKDDAAHVDPAAAASVEPSQTSEPADSSECQVITEAAATSNESDKVDR
EDKDDKEKDGDVDKKEKRDENKEGGARNLWVSGLSGDTRAKDLKQLCSKHGKVIGAKVVT
NARTPGSRCYGYVTMASSQDAENCIKNLHRTGMTVTDYL