| New model in OGS2.0 | DPOGS214467 |
|---|---|
| Genomic Position | scaffold690:+ 9375-17749 |
| See gene structure | |
| CDS Length | 1098 |
| Paired RNAseq reads | 80 |
| Single RNAseq reads | 216 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013353 (1e-104) |
| Best Drosophila hit | onecut (9e-72) |
| Best Human hit | hepatocyte nuclear factor 6 (3e-71) |
| Best NR hit (blastp) | PREDICTED: similar to One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2) [Apis mellifera] (4e-95) |
| Best NR hit (blastx) | PREDICTED: similar to One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2) [Apis mellifera] (4e-83) |
| GeneOntology terms | GO:0003702 RNA polymerase II transcription factor activity GO:0006350 transcription GO:0005634 nucleus GO:0030528 transcription regulator activity GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR003350 Homeodomain protein CUT IPR001356 Homeobox IPR010982 Lambda repressor-like, DNA-binding IPR009057 Homeodomain-like IPR012287 Homeodomain-related |
| Orthology group | MCL11814 |
Nucleotide sequence:
ATGGACGATACACGGCTCAGGGAGCGAGCGCCTCTCACGGTCATAGTGGCGCCCAGTAAC
GTGTCTCCACCCCGGCTGTCCCCCGCGGACCTGCTGCCCGACGGAGACGCTGCCTTCCAC
CCGCTGTCCGCCGTCAACGGCCGCCTCACACCGCCCGGGCTCGAGCCCGCGTCCTACGCT
ACTCTGACGCCCCTGCTCCCTCTGCCCCCCATCAGCACCGTGTCCGACAAGTTCGCGTAC
CACGCGGGCGGCACTTTCACGGTCATCCAGCAGCAGCAGTCCTACGCGTCCTTGTCTCCG
ACCGCCTACAATGAGCCGCTGTCGCCGCAGTCCGCGTACAGTCGGCGGAGCGCGTCACCC
GGCTCGTACGAGCGCCGTTCCCCCTCGCCGCCGCTGCCCAGCCCGGGGCTGGACCTGAAC
GCGGCGCTTCTGGCCAGAGAGACGAGAGACGAGCAGGCGCAGCAGACGCAGCAGAACGAC
ACGGAGGAGATAAACACCAAGGAGCTCGCGCAGAGGATAAGCGGAGAACTGAAGAGGTAC
TCCATACCTCAGGCGATATTCGCTCAGAGGGTGCTGTGTCGGTCGCAGGGTACGCTCAGC
GACCTACTCAGGAACCCCAAGCCGTGGTCCAAGTTGAAGTCGGGCCGAGAAACCTTCAGG
CGGATGTGGAAATGGCTACAGGAACCCGAGTTTCAAAGGATGTCGGCCTTGAGACTTGCA
GCGGCCCAGATACCACAGAGAGGCAGCTGCAAGCGCAAGGAGGATATGGCCTCGGATACC
CTTCCTTCCCCGAAGAAGCCGCGTTTGGTTTTCACAGATCTGCAGCGGCGTACTCTGCAG
GCTATTTTTAAGGAAACAAAGAGACCATCAAAAGAGATGCAAGTAACGATAGCGCGTCAG
CTCGGTCTAGAGCCGACCACTGTTGGCAACTTCTTCATGAACGCTCGCAGACGATCCATG
GACAAATGGAAGGATGACGACGCACCATCCACAGACTTGGACCAGCAATGCGACGGGCAG
GATCTAGACCACGTCCCCAGTCTAGACTCGGCGGAGTCTGAGGAGGATCACGACGACCAA
GACGATCATCTATTGTGA
Protein sequence:
MDDTRLRERAPLTVIVAPSNVSPPRLSPADLLPDGDAAFHPLSAVNGRLTPPGLEPASYA
TLTPLLPLPPISTVSDKFAYHAGGTFTVIQQQQSYASLSPTAYNEPLSPQSAYSRRSASP
GSYERRSPSPPLPSPGLDLNAALLARETRDEQAQQTQQNDTEEINTKELAQRISGELKRY
SIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA
AAQIPQRGSCKRKEDMASDTLPSPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQ
LGLEPTTVGNFFMNARRRSMDKWKDDDAPSTDLDQQCDGQDLDHVPSLDSAESEEDHDDQ
DDHLL