New model in OGS2.0 | DPOGS213856  |
---|---|
Genomic Position | scaffold764:- 8701-16889 |
See gene structure | |
CDS Length | 2457 |
Paired RNAseq reads   | 3111 |
Single RNAseq reads   | 8454 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009664 (6e-15) |
Best Drosophila hit   | cyclin T, isoform B (2e-96) |
Best Human hit | cyclin-T1 (1e-87) |
Best NR hit (blastp)   | PREDICTED: similar to Cyclin T CG6292-PB, isoform B isoform 1 [Apis mellifera] (6e-126) |
Best NR hit (blastx)   | PREDICTED: similar to Cyclin T CG6292-PB, isoform B isoform 1 [Apis mellifera] (5e-113) |
GeneOntology terms    | GO:0008024 positive transcription elongation factor complex b GO:0003711 transcription elongation regulator activity GO:0016538 cyclin-dependent protein kinase regulator activity GO:0009408 response to heat GO:0005700 polytene chromosome GO:0006350 transcription GO:0005703 polytene chromosome puff GO:0005634 nucleus GO:0008159 positive transcription elongation factor activity GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity GO:0007015 actin filament organization GO:0007049 cell cycle GO:0008360 regulation of cell shape |
InterPro families    | IPR015430 Cyclin T IPR015429 Transcription regulator cyclin IPR006671 Cyclin, N-terminal IPR011028 Cyclin-like IPR006670 Cyclin IPR013763 Cyclin-related |
Orthology group | MCL40442 |
Nucleotide sequence:
ATGGCTGGCGCACAAGAAAAATGGTATTTTACAAAAGTGCAACTACAGAATTCGCCAAGC
AGAAAATGCGGTTTAGATGCAGATAAAGAGTTAGCATATAGGCAGCAGGCCGCTAATCTC
ATACAGGATATGGGCCAACGGCTTCAGGTATCACAATTATGTATAAACACTGCTATAGTG
TACATGCATCGGTTCTACGCGTTCCACTCCTTCACGCAGTTCCACAGGAATGCTATAGCT
GCCGCTGCTCTCTTCCTCGCTGCAAAGGTGGAGGAACAGCCGAGGAAATTGGAATATGTA
ATAAAAGTGGCTCATGTGTGCCTGCACCGAGGTGAGAGTGTGAACGCTCTCACTCCGGAG
CAATATCAGGAACAGGCGCAGGATCTAGTGTTCAACGAGAATGTACTTCTGCAAACGTTA
GGTTTCGATGTGGCTATCGACCACCCGCACACGCACGTGGTACGAACCTGCCACCTTGTT
AAAGCTCCCAAAGACTTGGCGCAGACTTCGTATTTCATGGCGTCAAACAGTCTCCACTTG
ACTACAATGTGTCTCCAATACAGACCTACTATTGTCGCCTGTTTTTGCATACATCTTGCA
TCTAAGTGGAGCAATTGGGCGATACCTCAATCTAACGAGGGTCGTCACTGGTTCTCATAT
GTGGATAGGGATGTCACTACCGAAATGTTGGAACGCCTTACTTCAGAGTTCCTACACATA
TTCGACAAATGTCCGTCTAGATTGAAACGAAAGATGATGACTATGTCGAACAGTGGTAGT
TCACCTCACGCTGGATCCAGTTTTGATAAGAAGCACTCGCTGGCCAACAGTGATGAGATA
GACAAGTCGTTCGATAAAGAATACGAAAGGGAGAGGCGTCGACAACAAGCGCCCGGCGGT
TACGTGCCCGCTACCGCACCACAAGCAGCGCAGCCGCAAAAGATAGACTTCAATTTGTAC
AGAGAGAAGAGAGAAAGAGAGGAAAGAGAACGGCGAGAGGATAGAGAGAGACGGCAGCAG
GCCTTGCAACAGAGACCGGCGCCACAAAACAGACCCAACAACAACCCCCCACCACACAAC
AGACCGCCCCACAAACCCCCACATCCGTGGCCACACAAACCACCTCACAACAAACCGCCC
GACCGACATCGCCAGATCCCATCCACCTCCCATCCCATCAACCCGACACCCAACCCTCCA
GTACACACGGAAGTAAGGACGCGGCCGCCGTCATTATTCTCGCCAGAGAACGCCACGACG
CCGACCGCGGCTGCCGCGGCGCCACGACGCAGCAACCCTCCCCAGAGACCTAGACCCGAA
CCGCGGCCTAGTGTCAGCGTCGCGCAACCACCCAACGTGCCTAATATACCGCATATACCT
CAACCTGTGCCTCAGGAAAAACCAATCAGTCCTCACAAAAAGAGGCCCGATCCCACCGCC
GTAGTAAGAGACATGCAACCACCGGCCATACTGTCGCCGTTCTCGTCGCCTAGAGAAAAA
CAAAGGCCGAGATTAAATTCAAATTCGGAGCCAGAGCTGGTACCGGTGGTTAAGAAAATA
GATGAAACGCCCGGCTACGAAAACGTTGTAAGGGAATCGCAGCGCGGTAACGCTGTCAAA
ACGCGAGCTCCCGATAGAAAACCCGAAGCGAGGGCCTTGAATGGCATAGAAACTGATCCT
ACGTTGGTGTCGAATTTACTCAAAGAGAGCTTAGCCAAGCCGGCTCCGATCACTGTGGCG
ACGGAGAAGAAGTCGCCCGTTGAGAAGAAGGAACCTGTGGAAGTCCCACAACCCAACCCC
ATAGAACACCACCACTCTCACCCACAACCTCACGCACATACACACCCACAGCCTCATCAT
CAGTCACACCCTCAACCACATCCACACCCTCAGCAGACACCCACAGACGACGGCGACCAC
AAACACAAGAAAGACAAGAAAAAGAAAGAGAAACACAAACACAAAGACCGGGACAAGTCC
AAGGATGAGAGAAAGAAACACAAGAAAGATAAAGACAAAGAGAAAGATAAAGAAAAGAAA
GAACAACCGCCGCCAGCGCCGGAGACGGACGGCACGTTAAGGATAACGATACCCAGGGAA
AAGCTGTCGTCTAGTCCAGGGCTCAAGATCAAGATACCAAAGGAGCGATTGGCGGCGCCT
CCTCCACCGCCCAGCGGCCTCAAGATCAAGATCTCCAAGGAAGTGCTGGAGACATCAAGG
AAGCGGGCCGCGGGCATGCCGGAGGCCCCGCCGCATAAGCTGCCGCGACACGACCCCCAT
AAGGTAGGTTGGCCCCTCCCACCCCCCTACAGGCCCCCGCTACCCTACTACGTGGTGGCC
CCACCGCCGCCGTTATACTACGGCGACTACTTCTACGGGATGTTCAGACCGCAGCTCCCG
CAGCCTCCCCTACCACCGATGCCACCACCAGCCGTACCACCACCGCCGCCCGAATGA
Protein sequence:
MAGAQEKWYFTKVQLQNSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIV
YMHRFYAFHSFTQFHRNAIAAAALFLAAKVEEQPRKLEYVIKVAHVCLHRGESVNALTPE
QYQEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVRTCHLVKAPKDLAQTSYFMASNSLHL
TTMCLQYRPTIVACFCIHLASKWSNWAIPQSNEGRHWFSYVDRDVTTEMLERLTSEFLHI
FDKCPSRLKRKMMTMSNSGSSPHAGSSFDKKHSLANSDEIDKSFDKEYERERRRQQAPGG
YVPATAPQAAQPQKIDFNLYREKREREERERREDRERRQQALQQRPAPQNRPNNNPPPHN
RPPHKPPHPWPHKPPHNKPPDRHRQIPSTSHPINPTPNPPVHTEVRTRPPSLFSPENATT
PTAAAAAPRRSNPPQRPRPEPRPSVSVAQPPNVPNIPHIPQPVPQEKPISPHKKRPDPTA
VVRDMQPPAILSPFSSPREKQRPRLNSNSEPELVPVVKKIDETPGYENVVRESQRGNAVK
TRAPDRKPEARALNGIETDPTLVSNLLKESLAKPAPITVATEKKSPVEKKEPVEVPQPNP
IEHHHSHPQPHAHTHPQPHHQSHPQPHPHPQQTPTDDGDHKHKKDKKKKEKHKHKDRDKS
KDERKKHKKDKDKEKDKEKKEQPPPAPETDGTLRITIPREKLSSSPGLKIKIPKERLAAP
PPPPSGLKIKISKEVLETSRKRAAGMPEAPPHKLPRHDPHKVGWPLPPPYRPPLPYYVVA
PPPPLYYGDYFYGMFRPQLPQPPLPPMPPPAVPPPPPE