| New model in OGS2.0 | DPOGS209762 |
|---|---|
| Genomic Position | scaffold92:+ 13451-17769 |
| See gene structure | |
| CDS Length | 762 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 1 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005402 (2e-46) |
| Best Drosophila hit | CG5205 (3e-24) |
| Best Human hit | probable ATP-dependent DNA helicase HFM1 (2e-35) |
| Best NR hit (blastp) | PREDICTED: HFM1 protein [Oryctolagus cuniculus] (5e-50) |
| Best NR hit (blastx) | conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] (2e-45) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0004386 helicase activity GO:0005524 ATP binding GO:0008026 ATP-dependent helicase activity |
| InterPro families | IPR001650 Helicase, C-terminal IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal |
| Orthology group | MCL39953 |
Nucleotide sequence:
ATGTTTCCAGTGGCCCCTGTTAAGGCTCTGTGCACAGAACGTATTACCGAATGGTATTCA
AAGTACATGAAGCTTGGCCTCCTATGTATAGAAGTAACTGGCGACACCGACGTAGACTTC
TCACAGTTACAACCCTACAGAATAATAATAACAACACCCGAAAAATGGGATTTGATAACG
AGACGTTGTAACGACCTGTCCCTCGTGAAGCTCTTCCTTATAGACGAGGTACATTCCTTG
AATGACGAATCGAGAGGGCCCGTCCTAGAAGCTGTTGTTAGTAGAGTGAAGACTGTACAG
ATATTTTGCAACACTAGAAAAAGCGTGATGTTCACCGCTGAAACACTGTCCAAAGAGATT
ACTGTTGGCTTCAGTCCTGACCAAAGAGCGAAACTAACAACCATAGCGTCTTCAATAAGA
AACAAGAAATTACAGTCGTTGGTGTTGTCCGGCGTGGGTTGCCATCACGCCGGTCTCTTA
CTAGACGAAAGGAACGCCATTGAACGTGCGTTCAGGAACAGAGATCTTCCTATACTCATA
ACAACAACAACATTAGCCATGGGCGTTAATTTACCAGCTCATCTTGTTATTATTAAGAAC
ACACAGCAATATGTCAATGGCGCTTATAAGGAGTACAGTATAAGTACTGTGTTACAAATG
ATCGGTAGAGCGGGCAGACCGCAGTACGATCGTGAGGCCACCGCCGTTATTATGACCAGA
CTCCAGGATAAGGTAAGTATAACTATGATTACGTATATATAA
Protein sequence:
MFPVAPVKALCTERITEWYSKYMKLGLLCIEVTGDTDVDFSQLQPYRIIITTPEKWDLIT
RRCNDLSLVKLFLIDEVHSLNDESRGPVLEAVVSRVKTVQIFCNTRKSVMFTAETLSKEI
TVGFSPDQRAKLTTIASSIRNKKLQSLVLSGVGCHHAGLLLDERNAIERAFRNRDLPILI
TTTTLAMGVNLPAHLVIIKNTQQYVNGAYKEYSISTVLQMIGRAGRPQYDREATAVIMTR
LQDKVSITMITYI