| New model in OGS2.0 | DPOGS209763 |
|---|---|
| Genomic Position | scaffold92:+ 26400-35951 |
| See gene structure | |
| CDS Length | 1377 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 40 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG5931 (3e-06) |
| Best Human hit | probable ATP-dependent DNA helicase HFM1 (3e-26) |
| Best NR hit (blastp) | probable ATP-dependent DNA helicase HFM1 [Xenopus (Silurana) tropicalis] (4e-40) |
| Best NR hit (blastx) | probable ATP-dependent DNA helicase HFM1 [Xenopus (Silurana) tropicalis] (4e-32) |
| GeneOntology terms | GO:0008026 ATP-dependent helicase activity GO:0004386 helicase activity GO:0000166 nucleotide binding GO:0016787 hydrolase activity GO:0003676 nucleic acid binding GO:0005524 ATP binding |
| InterPro families | IPR004179 Sec63 domain |
| Orthology group | ND |
Nucleotide sequence:
ATGCGATATAAACTTTCCTGTAAAATTTCAAGATACCAGTCCCTGGTAGGTGGTTGTGAG
CCCTTACAAAGCTATCTTCACAAACGTCTGGCTGAGAACATCAATAGTGAGGTAGCTTTG
GGTACTATCCGTGATGTAGCTCAATGCGTACAATGGCTTAACTCCACGTTCTTGAGAGTT
AGAGCTGTTAAGGATCCTAAAAGATATCTTGGTTTACCACAGACAGCGACCGAGCAGCTC
ATATCGAAGAAAATAGAAGAGTTGTGTATTAGAGCAATGAACGGTCTTCAAAGTTCAGGA
CTTATAACTATGGACGAACTGGCGTGGATAGAGTCGACCGAGGCTGGCCGTCTCATGTCC
ATGCACTATCTAGACTTGGAGACTATGAAGCTCATTATGAAGATAGACGGCGATGCGTCG
CTGGATCGTCTTTTATGGTTGATATGCGAGAGTCATGAACTATCAGATATGTATCTCCGT
ACAGATGAAAGAAGATGCCTCAACACACTCAACAGGAACAACAATTCCTCTACTATTAGG
TACCAAATGAAGGGCAAGATTACTACACGAGAGATGAAGTTAAATTGTCAAAGTTGTTCA
AAAAACGTTGAAACAGAATCTCTGCTTGGAACATACCAAATAGAGCGTTCAGAATTAAAA
CCCAGAAGAAAATATAGAATATCCGACTTAGAAAAAATAGATGTTACACTACCGGCATCG
TTGATACCAAGTCAAAATACAAACCACACATTAAGTTTTGAAACAAAAACCGAACCAAAT
CTACATTTTACAAACCTTGAGGAAATACAAGATGAAATTATAACTAATAAAACAAACGAT
GAACATAACGACAGTTCAACTGATACAAATGAAGATTGCAACAAACTCGACCTAGAAGAA
ACAGATTTAAATTTAGAATGCGAGTTAACTGTCAACGACTCTTTTAATTTCGACGAAGCT
ATACTAGACCCTAAAACACTTCTACAGTCGAACTCAAACAATGAAGTTATAATTCCACCA
CCGGCTGAATTTTGCGATAATTCACCTGACGCGTCTCCACAAATAAATTTTCCTAACAAC
GATTCTGTATATGATCCACAACATTCAGCTTTAGACGATAATAACGAAGTCTCTCCTACA
AGCTTCAATGATGAAATAAAAGATATTTTTACCTCTAATTTCTCACAATACAGTAATTTT
GCTGTACACAATCAAAGCTCTTCTGGTATTGTCAGTCCATCCGTGAACAATAGAAACGAT
CTAGCAAGGGATCCTAACATCGCAACCGTAAATTCTAGTGACGTCATCACTCTAACACCT
AGTTCTCAGCTTCCCTGCAAAGTTTTCAATCTTGTATTAAAAGAAAACCAATATTAG
Protein sequence:
MRYKLSCKISRYQSLVGGCEPLQSYLHKRLAENINSEVALGTIRDVAQCVQWLNSTFLRV
RAVKDPKRYLGLPQTATEQLISKKIEELCIRAMNGLQSSGLITMDELAWIESTEAGRLMS
MHYLDLETMKLIMKIDGDASLDRLLWLICESHELSDMYLRTDERRCLNTLNRNNNSSTIR
YQMKGKITTREMKLNCQSCSKNVETESLLGTYQIERSELKPRRKYRISDLEKIDVTLPAS
LIPSQNTNHTLSFETKTEPNLHFTNLEEIQDEIITNKTNDEHNDSSTDTNEDCNKLDLEE
TDLNLECELTVNDSFNFDEAILDPKTLLQSNSNNEVIIPPPAEFCDNSPDASPQINFPNN
DSVYDPQHSALDDNNEVSPTSFNDEIKDIFTSNFSQYSNFAVHNQSSSGIVSPSVNNRND
LARDPNIATVNSSDVITLTPSSQLPCKVFNLVLKENQY