| New model in OGS2.0 | DPOGS209764 |
|---|---|
| Genomic Position | scaffold92:+ 47760-51928 |
| See gene structure | |
| CDS Length | 1401 |
| Paired RNAseq reads | 48 |
| Single RNAseq reads | 140 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005403 (4e-127) |
| Best Drosophila hit | CG7998 (9e-39) |
| Best Human hit | malate dehydrogenase, mitochondrial precursor (1e-31) |
| Best NR hit (blastp) | malate dehydrogenase, putative [Pediculus humanus corporis] (7e-55) |
| Best NR hit (blastx) | malate dehydrogenase, putative [Pediculus humanus corporis] (2e-45) |
| GeneOntology terms | GO:0030060 L-malate dehydrogenase activity GO:0005759 mitochondrial matrix GO:0006099 tricarboxylic acid cycle GO:0055114 oxidation reduction GO:0005488 binding GO:0006108 malate metabolic process GO:0006096 glycolysis GO:0005811 lipid particle |
| InterPro families | IPR010097 Malate dehydrogenase, type 1 IPR022383 Lactate/malate dehydrogenase, C-terminal IPR001236 Lactate/malate dehydrogenase, N-terminal IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IPR016040 NAD(P)-binding domain |
| Orthology group | MCL39954 |
Nucleotide sequence:
ATGACTCTCCCAGATCAGAGTAATTTAGTAAGATGGGGTAAAGATACCGGAAAGACTTGC
TATATCTGTGGGAAGGCAGTTGAAACTGCTAAGCATTTGTTAGTGGGATGTAAGGTACTC
CTGGATAGCGGTCAATACTCGCATCGTCACGATAGGGTTCTGGAAATCATACGTAAAGGT
CAGCCACTCGCTCTTCTTCTAAAACAATGTCCATTATTGGATGAGATAGCACTTTATGAT
ATTTGTGCAACTTGTGGCTACGGCATGGAGTTGAGTCACGTTGATACAAAATGTAAGGTC
TCTTCTTTCTCTGGCAGACATATGCTTTGCGATGCTCTCAAGGGCTCAAGAGTTGTTGTA
ATAGTCGCTCGAAACGAATGCGATTCATTTGAAAATAGTGCCCCAATTGTCACAGAGATT
GCATTACAAATTTGTAACACATGTCCCCAGGCATTTACAATCGTAGCCACGGAACCAGTG
GAGAGTATGGTTCCGTTAGTCAGCGAGATACAAAGACTACGTTCGCAATACAATCCAAGA
TTTCTACTTGGATGTGTAGAGCTGAACTGTGTGCGAGCTAATACGGTCTTGGCAGATTTT
CTTAGAGTACCGCCAGAGTCAGTTAGAGTTCCGGTGGTAGGAGGCGCTACTCCAGAGACC
ATGGTTCCCGTACTCTCCGCAGCTGTACATCCTTGCACACTGTCGCAGGAACAGACGGAA
TGTGCTACCTCATGTATAATGAGCGGCAACGAAGCTGTATGTGCTGCTAAAGGTTGCGCG
ACAGCAACTGCATGTCTTTCGGGAGCCTTTGCTGTGGCTCGTACTACGATCAATGTGGTG
AAAGGTTTACAGGGTAGGAAGAACGTTGTGCAGTGTGCTTATGTAGACAGTCTCGGAACA
TGTGCTCCGGGATGTCAGTTTTTTGCTAGTGAGGTTATCCTCGGACCAGCTGGTGTAGAA
AAGAATTTAGGTATACCAGAGCTTTCTAAATTTGAAAACTGTCTCTTATGCCACTGTCTA
CCGTATGTCCGTAATGAAATCGCTCGTGCAATTTGGCTCGTGTACACGATGTGCCAGCAG
TGCTGCTGTTATGGATGCACTGTTCATCCCAGCACATGCTACACTCCGCCCATAGTTCCC
TGCGTACCACCAACCAACTGGACCTGTGACTGTCCCGACGCTTGCCGAGATGAATACCTC
GCCTCCATCTGTCGTGAGATGACCTGCATGTGCGGTAGTACAGCGCTGTGCTGGAGGCCG
CGGGAAGCCGACTATGATGCCAAACGAGCCTCGAACCTTACACATCAAATGCCGTTGAGG
AGCGCCGCCTGTAGTGTTTGTAACGTGCCACGAAGCGTGCGAATTCAACAGGCCTTACGA
GAAAAGAAGGGAGATTTTTAA
Protein sequence:
MTLPDQSNLVRWGKDTGKTCYICGKAVETAKHLLVGCKVLLDSGQYSHRHDRVLEIIRKG
QPLALLLKQCPLLDEIALYDICATCGYGMELSHVDTKCKVSSFSGRHMLCDALKGSRVVV
IVARNECDSFENSAPIVTEIALQICNTCPQAFTIVATEPVESMVPLVSEIQRLRSQYNPR
FLLGCVELNCVRANTVLADFLRVPPESVRVPVVGGATPETMVPVLSAAVHPCTLSQEQTE
CATSCIMSGNEAVCAAKGCATATACLSGAFAVARTTINVVKGLQGRKNVVQCAYVDSLGT
CAPGCQFFASEVILGPAGVEKNLGIPELSKFENCLLCHCLPYVRNEIARAIWLVYTMCQQ
CCCYGCTVHPSTCYTPPIVPCVPPTNWTCDCPDACRDEYLASICREMTCMCGSTALCWRP
READYDAKRASNLTHQMPLRSAACSVCNVPRSVRIQQALREKKGDF