| New model in OGS2.0 | DPOGS209768 |
|---|---|
| Genomic Position | scaffold92:+ 94673-95743 |
| See gene structure | |
| CDS Length | 759 |
| Paired RNAseq reads | 651 |
| Single RNAseq reads | 2017 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005409 (4e-96) |
| Best Drosophila hit | signal recognition particle receptor beta (5e-40) |
| Best Human hit | signal recognition particle receptor subunit beta (6e-40) |
| Best NR hit (blastp) | signal recognition particle receptor beta subunit [Bombyx mori] (3e-111) |
| Best NR hit (blastx) | signal recognition particle receptor beta subunit [Bombyx mori] (1e-94) |
| GeneOntology terms | GO:0005515 protein binding GO:0005769 early endosome GO:0005770 late endosome GO:0005905 coated pit GO:0006826 iron ion transport GO:0009925 basal plasma membrane GO:0016324 apical plasma membrane GO:0030139 endocytic vesicle GO:0048471 perinuclear region of cytoplasm GO:0055037 recycling endosome GO:0060395 SMAD protein signal transduction |
| InterPro families | IPR019009 Signal recognition particle receptor, beta subunit IPR006689 ARF/SAR superfamily |
| Orthology group | MCL14433 |
Nucleotide sequence:
ATGGAGGCTGAATCTGAAGTAATTAAAGAAAAAATTCACACTGAACCAATCCTAAATGAC
CCACGATATATAACCTTATTGAGTATAATAGTGCTTTTATTCACTCTTGTGTTTTGGTGG
TGTTTTTCAAGGCGTCGGCATTTGAGGCGGTCGGTGCTACTAACGGGACTTTCAGATTCA
GGGAAGACTCTTTTATTTGTGAGACTCTCTTACTCACAGTATAGACAAACTTTCACATCT
ATGAAAGAAAATATCGAGGAATATATTACATCCAATAATGCCCTCAGGATCGTAGATCTA
CCCGGCCAGGAAAGATTGAGAAACAAATTTTTTGATCAATACAAGAGCAGTGCTAAAGCC
ATTGTATATGTTGTAGACTCTGTAACCATTCAGAAAGAAATAAGGGATGTCGCTGAATAT
CTTTATACCATTTTGCTTGATTCAGTAGTGCAGAGCAATTGTCCTCAGTTTTTGATTCTA
TGTAACAAACAAGACCAGCCCATGGCCAAAGGCAGTCAAGTTATCAAGGGTTTATTAGAA
AAGGAATTAAACTTGGTCCGTGTCACAAAATCTAGTCAGCTGCAATCAGTTGATTCATCG
CAAAGTAATAATTCTTCATACCTCGGAAAGCTCGGAAAAGATTTTGAATTTTCTCATCTG
AACTGCAAAGTAGAATTTGCTGAGAGCTCAGCTAACACTGGGGATGACGATAACCCTGCT
GATATGAAGGCTTTGAAGGATTGGATCTCAAAATTATAG
Protein sequence:
MEAESEVIKEKIHTEPILNDPRYITLLSIIVLLFTLVFWWCFSRRRHLRRSVLLTGLSDS
GKTLLFVRLSYSQYRQTFTSMKENIEEYITSNNALRIVDLPGQERLRNKFFDQYKSSAKA
IVYVVDSVTIQKEIRDVAEYLYTILLDSVVQSNCPQFLILCNKQDQPMAKGSQVIKGLLE
KELNLVRVTKSSQLQSVDSSQSNNSSYLGKLGKDFEFSHLNCKVEFAESSANTGDDDNPA
DMKALKDWISKL