| New model in OGS2.0 | DPOGS212210 |
|---|---|
| Genomic Position | scaffold197:+ 18019-19068 |
| See gene structure | |
| CDS Length | 1050 |
| Paired RNAseq reads | 35 |
| Single RNAseq reads | 140 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001156 (5e-104) |
| Best Drosophila hit | CG7998 (5e-48) |
| Best Human hit | malate dehydrogenase, mitochondrial precursor (1e-41) |
| Best NR hit (blastp) | GK22135 [Drosophila willistoni] (2e-50) |
| Best NR hit (blastx) | GM25384 [Drosophila sechellia] (4e-48) |
| GeneOntology terms | GO:0030060 L-malate dehydrogenase activity GO:0005759 mitochondrial matrix GO:0006099 tricarboxylic acid cycle GO:0055114 oxidation reduction GO:0005488 binding GO:0006108 malate metabolic process GO:0006096 glycolysis GO:0005811 lipid particle |
| InterPro families | IPR010097 Malate dehydrogenase, type 1 IPR022383 Lactate/malate dehydrogenase, C-terminal IPR001236 Lactate/malate dehydrogenase, N-terminal IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IPR016040 NAD(P)-binding domain IPR001557 L-lactate/malate dehydrogenase |
| Orthology group | MCL39504 |
Nucleotide sequence:
ATGAATGTATTTAGTAGAAGTTTACAAAGAACACAATTTAAATCTCTTTGTTCTGTAAAA
AATTATGTGCAGCGAAGAAATGTACAAATATCGATAGTCGGTGCCGCTAGTGACATTGGA
AAGAACGTGGCATTGCTGTTGAAACGGAATCCTTATATTACGAGGCTGCACTTATACGAT
GACAATAATATAGTAAAAGGTATTGGCCTGGAATTGGAACAGATTCCCGGAGGACCCAAA
GTAGCTTCATTTTCGGGGGATCCCTTTTTGTCGGCAGCTATAAGATACTCCAATCTGGTA
CTGCTTGTTTCGAGAACTCCTCGTAAACTCGGATTTTCCCGTGAACAGATGCTAGCCACG
AATGCTATACCCGTATATAAATTGTGCAAAGTTTTGTCATACCAAAACCCTGATGCCTTT
TTTGCCATTTCAACTAATCCTATAAATTCAATAATACCGTTTGCAAACTTATTATTAAAA
AACTGCAACGCTCATAATCCGTTTAAACTCTTCGGTATAACCCACATCGACACGACGAGA
GCCAGGGCCTTCATTTCAAACACTTTGAACGTTAATCCGAGACATCTCTATGTACCGGTG
ATCGGAGGGCACTCTGACGAAACGATAGTTCCCCTATTTTCAAATTTGTGTCCTAGCCAT
TATTGCGTCGGTCACTGTGAAGCTGACACATTGACACGTCTGATTAAGAAATCTGGCACA
GAAGTGTTAAACCGAAAGCACGGCAGTGATTCATCGACGCTGGCTATGGCCTGGTCGATC
AACGAATTCGTCCAAAATCTCATTGAAGCTCTGTACGGGAACTGTGTAATCGTGAACAGT
TATACAGCGAATCCTCATTTTGGAACAAAATTTTTTTCAGGTCCGACTAAGGTTGGACCC
GAAGGCGTCATAGAAACATGCAATAAGACCTTTCACATGAGTGATTATGAAAGCAAACTC
CTGGAGCGCGCTGTTCCCATCATAAACAGGGACGTGGCTGAGGGTGAAGCGCATGTCAGC
GTCCTCGAAAGTGCCAGGAGTTGTTACTAG
Protein sequence:
MNVFSRSLQRTQFKSLCSVKNYVQRRNVQISIVGAASDIGKNVALLLKRNPYITRLHLYD
DNNIVKGIGLELEQIPGGPKVASFSGDPFLSAAIRYSNLVLLVSRTPRKLGFSREQMLAT
NAIPVYKLCKVLSYQNPDAFFAISTNPINSIIPFANLLLKNCNAHNPFKLFGITHIDTTR
ARAFISNTLNVNPRHLYVPVIGGHSDETIVPLFSNLCPSHYCVGHCEADTLTRLIKKSGT
EVLNRKHGSDSSTLAMAWSINEFVQNLIEALYGNCVIVNSYTANPHFGTKFFSGPTKVGP
EGVIETCNKTFHMSDYESKLLERAVPIINRDVAEGEAHVSVLESARSCY