| New model in OGS2.0 | DPOGS212213 |
|---|---|
| Genomic Position | scaffold197:+ 157228-159095 |
| See gene structure | |
| CDS Length | 1203 |
| Paired RNAseq reads | 588 |
| Single RNAseq reads | 1403 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001159 (0.0) |
| Best Drosophila hit | vacuolar protein sorting 36 (1e-102) |
| Best Human hit | vacuolar protein-sorting-associated protein 36 (2e-88) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL011556 [Aedes aegypti] (2e-127) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL011556 [Aedes aegypti] (3e-118) |
| GeneOntology terms | GO:0003730 mRNA 3'-UTR binding GO:0008593 regulation of Notch signaling pathway GO:0008283 cell proliferation GO:0042981 regulation of apoptosis |
| InterPro families | IPR007286 EAP30 IPR021648 Vacuolar protein sorting protein, Vps36 |
| Orthology group | MCL13474 |
Nucleotide sequence:
ATGGATAGATTTGAATACATAGAAGCTAGACTATTTGAAGGAGAAACTTATCTCAAACGA
GATAAAAATGTGAAAATCTATGATGGTGAAGATAAGACCCAATTTGTAGATGGAGAAATT
ATTCTAACAACTCACAGAATACTGTGGGGTAAACCTGGTGATATACCCAAGGGGCTTGTT
TGTTTATCACTCCACCTATATTATATATTCTGTGTAGAAGAGGAGAGCGGAGGTGTTTTT
GGTCTTGGAGGTCCAAAACGAATCATATTGCACCTTGGTCCAGCACTTCCAGGTAAAAGA
CCAGGACCGGCTGTAGTGAGCCCATTTCACTTCATAAAATTTTCATTTAAAGATGGAATT
GATTCTGTGTTTTATAAGGCATTAAACGATGCCGTCGCTGCGAAAGCTTGGCAGATAGAG
ACACCTAATAATTCTAATTTAACTTCACCTACAAGTGTTACGCCTAAGACTTCAACATCA
CCTATAAATTCTAAAATTCGTTCTGGTATTGTTGGTATCGAGAGGAGTATTGAAGAGCAA
CACAAAGCTACAGATCAAAGTATCAGTATAGCTTTTCAGGATTTAACAAAACTCATGGAG
AAAGCTAAAGAAATGGTCACAATATCTAAGACAATTTCATCGAAAATCAGGGAGAAGCAA
GGTGATATATCAGAGGACGACACAGTGAGATTCAAATCCTACTTAATGAGTTTGGGTATA
GACGATCCTGTCACTAGAGATGCATTTAGATCAGACTCGGAATATTACATGGGTCTCTCT
CATCAAATTGCCGATATGATAGTTGCTGCTTTGGTGGATTGTGGCGGTATCATGTCCTTG
GCGGATGTGTGGTGTAGAGTGAACAGAGCTAGAGGTCTAGAACTCATTTCACCCGAGGAT
TTATTGAATGCTTGCAAATTGTTACAGACTATTGATGCTCCAATGTCCTTACGTAAATTT
CCAAGTGGTGCATGTGTGTTACAACTTAACAGTCATAGGGATGAAGAAGTTGCAAAAACA
ACAAGTGAACTGCTTGAGGCAAGCGGCTTGTTAACCCCGGAGAAGTTATCTCAAATAGCA
AACGTTTCCGTCCTACTTGCACGAGAACAACTATTCACAACTGAACGAATGGGCCTAGCT
TGCAGAGATGAATCTATCGAAGGATTGGCTTTCTACCCTAATTTGTTTCTAAGCAAAGTG
TAA
Protein sequence:
MDRFEYIEARLFEGETYLKRDKNVKIYDGEDKTQFVDGEIILTTHRILWGKPGDIPKGLV
CLSLHLYYIFCVEEESGGVFGLGGPKRIILHLGPALPGKRPGPAVVSPFHFIKFSFKDGI
DSVFYKALNDAVAAKAWQIETPNNSNLTSPTSVTPKTSTSPINSKIRSGIVGIERSIEEQ
HKATDQSISIAFQDLTKLMEKAKEMVTISKTISSKIREKQGDISEDDTVRFKSYLMSLGI
DDPVTRDAFRSDSEYYMGLSHQIADMIVAALVDCGGIMSLADVWCRVNRARGLELISPED
LLNACKLLQTIDAPMSLRKFPSGACVLQLNSHRDEEVAKTTSELLEASGLLTPEKLSQIA
NVSVLLAREQLFTTERMGLACRDESIEGLAFYPNLFLSKV