| New model in OGS2.0 | DPOGS202338 |
|---|---|
| Genomic Position | scaffold579:- 29037-31150 |
| See gene structure | |
| CDS Length | 1152 |
| Paired RNAseq reads | 267 |
| Single RNAseq reads | 682 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004835 (1e-179) |
| Best Drosophila hit | CG1116, isoform A (4e-75) |
| Best Human hit | retrograde Golgi transport protein RGP1 homolog (1e-67) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (8e-112) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (1e-108) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR014848 Rgp1 |
| Orthology group | MCL14335 |
Nucleotide sequence:
ATGATTGAGCTCTCAGCCAAACTTACCACTGGCAGTGTTTATTTAGCTGGAGAGGCTTTG
GAATGTCGTATATCTTTTTGTCATACAACTCAACCTGAACATAGAAAATCACAAAGCCAT
AGTGATATCCTGGAAAATTTGGCATGGGCTTCCGCTCAAATACATTGTTTCTTTTCAACA
TCTAAAAATACCACAGACAAAAATGTTATTGCAGAAAAAACAACAGCTCTCGAAGTAACC
TCATGTGATATAGGAGATGTGGTATTTCATACTAAACCTAAGATATTGTTTTGTGACTTA
ACTATACCACTCGGGGAAACAAAGACTTTTTTGTATCGAGAAACTCTGCCATTAGAAGCA
CCTCCATCATACAGAGGCACGGCAGTTAAATACTCCTACAAGATCACAATAGCCACACAG
AAAGTTGGGTCTCATATCAAAATGGTCCGTTTACCGTTTAGAGTACTACCTATCAGTCCT
GTTATGAACTTGCAAGACCTTCCTGCTTTGTGTGAAACAACAGACATACTACAACCAACC
AGTCCATTTTCAGAAGGTAGGAAAGTTGAAACTCATCTGACTATGGCCTTACAAGTTTTG
CAGAATTTAACAGCCCGAAGAAGCCCAAACTCATACATGATAACCAATGGCAGGGGGAAA
GTAGGTCGTTTCTGCCTATTCAAATCTGCATACAGATTAGGTGAAGACATTGTTGGTACA
TTTGATTTCTCTGTAGGAACTATAACATGCATGCAGGTGTCTGTATCACTACAACCTGAA
GAAGTACTAAAATCTAAGACGCCTTCAAAGAATGTAAACAAAGAAAGCTGCAGTAGATCA
ATGACAGTCGCAAGGTATCATGAGGTGACTTTGGGACTTACACACTCGCAGCTTATCTTA
CCCATACCACTACATATAACTCCGGCCTTCGAAATTGATGAGGTATCTCTGAATTGGCGC
CTACATTTTGAATTTGTGTTAAGTCAAGATAAGCTATTACCCAATCCGGAGGACAAAGAT
TGGAATGCACCACTCAATGTGCCAATAGAAACCATGGTCTGGAATCTTCCTGTAAAAATT
TACACGACACTTCCCAAACAAATAGCCCAACAATTCCATGGGAACGACAACTATACTATG
TTTATAAAATAA
Protein sequence:
MIELSAKLTTGSVYLAGEALECRISFCHTTQPEHRKSQSHSDILENLAWASAQIHCFFST
SKNTTDKNVIAEKTTALEVTSCDIGDVVFHTKPKILFCDLTIPLGETKTFLYRETLPLEA
PPSYRGTAVKYSYKITIATQKVGSHIKMVRLPFRVLPISPVMNLQDLPALCETTDILQPT
SPFSEGRKVETHLTMALQVLQNLTARRSPNSYMITNGRGKVGRFCLFKSAYRLGEDIVGT
FDFSVGTITCMQVSVSLQPEEVLKSKTPSKNVNKESCSRSMTVARYHEVTLGLTHSQLIL
PIPLHITPAFEIDEVSLNWRLHFEFVLSQDKLLPNPEDKDWNAPLNVPIETMVWNLPVKI
YTTLPKQIAQQFHGNDNYTMFIK