| New model in OGS2.0 | DPOGS202339 |
|---|---|
| Genomic Position | scaffold579:- 19283-27423 |
| See gene structure | |
| CDS Length | 2436 |
| Paired RNAseq reads | 875 |
| Single RNAseq reads | 2513 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004836 (0.0) |
| Best Drosophila hit | CG42233 (4e-89) |
| Best Human hit | DDB1- and CUL4-associated factor 5 (2e-120) |
| Best NR hit (blastp) | wd-repeat protein [Aedes aegypti] (2e-149) |
| Best NR hit (blastx) | wd-repeat protein [Aedes aegypti] (7e-139) |
| GeneOntology terms | GO:0005739 mitochondrion GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain |
| Orthology group | MCL15763 |
Nucleotide sequence:
ATGGCGAATATTGCGAATCCTTTACCATATATTACCAAGAGAGAAAGTGGACTTTTATGT
GATCTTAAAACAAATTTATTTAATAAACGGCTTAACGCTTCTAAAAATTTATATCGTCGT
GATTTAGTTTGTCATTTCGGATGTGTTAACGCAATTGAGTTTTCATACAATGGCGAATTG
CTCGTATCAGGAGGAGATGACAGAAGAGTTATGTTATGGCAGTTTGGACAGGCAGTCCTC
AACTATGGGAAGCCTGAATCCATGAAAGCACTACATCTATCAAACATCTTTTGTTTAGGT
ATAACTTCTGATAATCAGAAGATATTCTCCGGTGGAAATGACGATAGGGTCATAGTTCAC
GATCTAGAGAGCAAAAGTCCTTTAGAAGTTCTTCAGCATCAACGCGCCGTCTCCAGCCTC
AGTATAGACCCTTTCAATGAGCAGGTCGTCGCCACCGCTGGGAACGATGGCCGGCTATTA
CTGTTTGACACCCGTCAATCTGTACACGAGTCCCTGGTCGTTTCCCGCAGTAGGAGAGCT
TTTCACGGTGTTATGTATCACCCCCAGCAGGTTAGCATGCTCGTTTCCGCTAATGAGAGA
AACGGTGTAGCTCTATGGGACCTGCGATCTCCAAAACATCCAGTAATTCGCTACGTTGGT
AGCAAAGGATCTACTCAGAATGGCATGAGTGTGTGCTTCAACCATTTGGGGACACATATA
GTCGCCCTGCGGCGTCGCTTGCCTCCCGTACTCTACGCCGTTCACTCACCAGAACCCTTG
GCGGAGTTCTACCATCAAGATTACTACAATTCCTGCACGATGAAGAGCTGCTGCTTTGCT
GGCAAGAACGATCAGTTCGTGCTCTCAGGATCAGACGATTTCAACTTGTATATGTGGAAG
ATACCCGACACGGGCGGCGGTTGTAACGATATGCTGGTTGAGCCGCCTCATCTAGTTCTA
TATGGACACAGATCTATCGTGAATCAAGTGCGATACAACCCGCACTATTGTCTCATAGCC
TCGTCCGGCGTTGAGAAGATTATTAAGTTGTGGTCAGCCCTACAGTACCCTGACATGCGA
GGGACTCTCCTGGAAGAGGCCCAAGGTCCGGACAACCCTAGAGAGATTTACACACACGAG
GATTATGTGTCACTCGTACATCACAGCGGACAGTACTTGTCCCACAACTACGCGGAGCAA
TCAACGAGCGAGGACCCCAGGATGATGGCGTTCTTCGATTCCCTCATGCAGAGAGAGCTG
GAGTGTCTCGCCGAGGACACGGACTCCTTGGACGGCTCCAGCTCGAGGTCGGCCCGGGAC
AGCGGGTCAGACTCCAGTGATAGCGACCAGATCGCTGTCGATTTCCCATCCCTGCCGCCA
AAGAGAAGATGCCCGAGCCAGCGATGTCAGAACAGACTGGCCCGTCTCGTTGCCTCGCGA
TATCCCAAGAATGTTCGGTCACAGAAGAGAGGTGCACTGAGACGTAACAAACAACCTAGA
ACGTGTGTGAACAAATCGTCGACTACCGTGAAGGGGGCTCGTCCAGCGAGACGGGCGAGG
GGGCGAAGGCCTGCGACCACGAGGAGACTGTCGCCCTCCAGCGAGCGGACCGACTCAGAC
GAATCAGCATACTGCATGTACAGGAGTACGGGCCGGATACTCCGCCCAGCCAGGAGACGA
ATGAACAGCACAAGATCCAATAAAAGAAAATGTAAAGTTACTTGCTACAGAAGATCCATG
AATTTAAGGAGCAATGGTAACGGAGCTGCCCAAGACAGCAGCGACAATAATAATGTTGAA
AACGTCGACACTTTTGAAGAAAATCTAGCTTTACCGAGCACAAGCACAGCTGAAGTGGAT
TCAGACGATGACCAGTCAGTTAGCAGCCGACCCAGGTCTGTGCGCAGTCAAAACCAGTCC
ATTCCTAATTTAGTGAACATCGTCCCCACACCTATTAACGGATCAATTGGAGATTCTTTT
AGAAATGATAATCAAGAATCGGAGAGCAACAACTCCTCTCCGCCGCCAGAGACCCGTCTG
AGGATGAATTTGCGGAGAGTGAGAAGGAACGGTCGGCAGGCCATGAACAGGTCGGATTCG
AGTGGGTCACCGCCCATGAAGACGCAAGCGGATAGAGCGCTCACGGAGAGGCTGTCACCC
AAAGGTTTCAACCGGACTCTAGCGAGACTGATGAACGAGACTAATGAAAGCGAGCTTGAG
AGCAGCTGTAGCACTGAAGGCAGTCTGTGGCCGGCTCCAGATACTTTGGGAACCCCCGAC
AGTGGTGTGGGAACTGTGGCGGGGAGTAGCACAAGGAATCCCCTCCCCGCTGACGAAGTC
TCCGACGATCCTGAATTTCAGGCTTATAAATTTCGACAAAGGGTCAAAAAGGCACGCAGA
AACTACAGGAATCACATGGAATCAGACTCCAACTGA
Protein sequence:
MANIANPLPYITKRESGLLCDLKTNLFNKRLNASKNLYRRDLVCHFGCVNAIEFSYNGEL
LVSGGDDRRVMLWQFGQAVLNYGKPESMKALHLSNIFCLGITSDNQKIFSGGNDDRVIVH
DLESKSPLEVLQHQRAVSSLSIDPFNEQVVATAGNDGRLLLFDTRQSVHESLVVSRSRRA
FHGVMYHPQQVSMLVSANERNGVALWDLRSPKHPVIRYVGSKGSTQNGMSVCFNHLGTHI
VALRRRLPPVLYAVHSPEPLAEFYHQDYYNSCTMKSCCFAGKNDQFVLSGSDDFNLYMWK
IPDTGGGCNDMLVEPPHLVLYGHRSIVNQVRYNPHYCLIASSGVEKIIKLWSALQYPDMR
GTLLEEAQGPDNPREIYTHEDYVSLVHHSGQYLSHNYAEQSTSEDPRMMAFFDSLMQREL
ECLAEDTDSLDGSSSRSARDSGSDSSDSDQIAVDFPSLPPKRRCPSQRCQNRLARLVASR
YPKNVRSQKRGALRRNKQPRTCVNKSSTTVKGARPARRARGRRPATTRRLSPSSERTDSD
ESAYCMYRSTGRILRPARRRMNSTRSNKRKCKVTCYRRSMNLRSNGNGAAQDSSDNNNVE
NVDTFEENLALPSTSTAEVDSDDDQSVSSRPRSVRSQNQSIPNLVNIVPTPINGSIGDSF
RNDNQESESNNSSPPPETRLRMNLRRVRRNGRQAMNRSDSSGSPPMKTQADRALTERLSP
KGFNRTLARLMNETNESELESSCSTEGSLWPAPDTLGTPDSGVGTVAGSSTRNPLPADEV
SDDPEFQAYKFRQRVKKARRNYRNHMESDSN