New model in OGS2.0 | DPOGS202340  |
---|---|
Genomic Position | scaffold579:- 16379-18211 |
See gene structure | |
CDS Length | 1833 |
Paired RNAseq reads   | 327 |
Single RNAseq reads   | 836 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004837 (0.0) |
Best Drosophila hit   | CG1550 (2e-173) |
Best Human hit | tubulin--tyrosine ligase-like protein 12 (4e-135) |
Best NR hit (blastp)   | PREDICTED: similar to CG1550-PA [Apis mellifera] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG1550-PA [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0004835 tubulin-tyrosine ligase activity GO:0006464 protein modification process |
InterPro families   | IPR004344 Tubulin-tyrosine ligase |
Orthology group | MCL15449 |
Nucleotide sequence:
ATGGATGGCATATCGAGTTATAACTTATTCATAGCAGCACATAAGCCGCAACTCGTTCTG
TCCGGAGTCCCGGAACATTTTTGGCCGGTTTTATGTAAGAAACTTAAAGATCAAATATTT
GATTCGGGCTTATCCTTTCAGTTAGTTAAAATAGATTACGAGGACGATGAAAAAGAATCT
TATGACCCGTTGTGGAGTGTTATGGCTATCAGTGACTTAGATCCTACAGATTCCAGTAAT
ATTTTCCTAGTAGATCATGCATGGACTTTCAAGGCTAACACTATTAAAAGTAGTCTTAGA
AATATGCCGGCCTTATTAGAAAGGATGTGTAATCTTATGCAAATTGTTAGAGAAACAACT
GAGGAACAAATAGAGGAAGTGTATCAAAATGTATGGAAATATGCAAATACTTATTCTGTT
GGAGGAGACGAGCTATCAGTTGAAGACAGAGTACCAGTGTGGTATTTAATGGATGAGTTG
GGTTCAGCTATCAATCATTCTGATCAGCCAAATTTCAGAGCTGTACCATTTATATATATA
CCCGAGCAAATCACATATACTTTACTTTTCCCAATAGAAAATGTTGAAGAAGGTGATTTG
ATAACAAGAAACTTCATAGAGGGCAAATTTTCAGATCCAAAACAAAGAGAAGCCATGCTG
ATTCCATGGAAGTATTATGAACATTTTGATGACAATTTCAGTCAAACCGAACCTGATATT
AACTATTTTTTAGAGGGGCATATTGTTGAGTCACTACCTGATTTAGATAATCTGCAAAGC
AAAGTAAATGTATCAGGAAAGCTTAAAGTTTTTTCAGAATATGAATATATAAATCAGTAT
CTGACAGCAGATGAGTTTCAAATAGTTGACAGTGAAAGTGAAGCAGATATATTATGGTAT
ATAGAACACTATAAAACTTTTAAGGAATTAAGTGTTAACTCCCCCAACAAGTTTGTCAAC
CAATTCCCTTTTGAATATGTTGTTACAATAAAAGATATTTTGGCTATCATAGCAAGGAGA
AACAATAAAATCTATGGGAATGCAGAACTTGAAACGTTTCCCACTTGGTTACCAACAACT
TTTAACATGAAGACTGAGCTTTCGAAGTTAGTGGCTTATTACATGCAGAGAAAAAAACAA
GGTCTGGATAATCACTGGATTTGTAAACCTTACAATCTTGCGAGGGGTTTAGATACATAT
ATTACTGATAACTTAGATTTTCTATGCAGGCTTCCACTGTCAGGCCCCAAGATTGCTCAA
AAATATATTGAAAATCCTGTCCTATTTGACAGAGCTGATATCGGGAAGGTTAAATTTGAT
ATTCGTTATGTTGTTCTTCTCAAATCTGTTAATCCAACTGAAGTTTTTGTGTACAATAAT
TTCTTCTTACGGCTGTCTAATAAAGAATTTTCAATGGACAACTTTGATGATTATGAAAAA
CATTTTACTGTAATGAATTACACTGAAGGAGCGCCGTTGTTTAAATTATTATGTGAAGAT
TTTAAAAATGCCTGGTCTAACCAGTACCCAGATTACGAATGGGATGAAGTAGAGCGGTCT
ATATTTAATATGCTGTCTGAATTGTTTACATGTGCTACTGCCAAAGAACCCCCTCTTGGA
ATAGCGAGAAGTCCCCAATCAAGAGCTTTGTATGCAGTCGATGTGATGTTGAGTTGGGAT
AAAAATGGTACTGTCATACATCCAAAGCTACTAGAATTAAATTGGATGCCTGATTGTCGA
AGAGCTTGTGAATATTATCCTGACTTTTACAATGACATATTCTCTGTGCTATTTTTAGAC
AAAACTGTTGGGTCTTGTACCAAGATCATGTAA
Protein sequence:
MDGISSYNLFIAAHKPQLVLSGVPEHFWPVLCKKLKDQIFDSGLSFQLVKIDYEDDEKES
YDPLWSVMAISDLDPTDSSNIFLVDHAWTFKANTIKSSLRNMPALLERMCNLMQIVRETT
EEQIEEVYQNVWKYANTYSVGGDELSVEDRVPVWYLMDELGSAINHSDQPNFRAVPFIYI
PEQITYTLLFPIENVEEGDLITRNFIEGKFSDPKQREAMLIPWKYYEHFDDNFSQTEPDI
NYFLEGHIVESLPDLDNLQSKVNVSGKLKVFSEYEYINQYLTADEFQIVDSESEADILWY
IEHYKTFKELSVNSPNKFVNQFPFEYVVTIKDILAIIARRNNKIYGNAELETFPTWLPTT
FNMKTELSKLVAYYMQRKKQGLDNHWICKPYNLARGLDTYITDNLDFLCRLPLSGPKIAQ
KYIENPVLFDRADIGKVKFDIRYVVLLKSVNPTEVFVYNNFFLRLSNKEFSMDNFDDYEK
HFTVMNYTEGAPLFKLLCEDFKNAWSNQYPDYEWDEVERSIFNMLSELFTCATAKEPPLG
IARSPQSRALYAVDVMLSWDKNGTVIHPKLLELNWMPDCRRACEYYPDFYNDIFSVLFLD
KTVGSCTKIM