| New model in OGS2.0 | DPOGS205197 |
|---|---|
| Genomic Position | scaffold529:- 33841-40379 |
| See gene structure | |
| CDS Length | 3429 |
| Paired RNAseq reads | 295 |
| Single RNAseq reads | 1056 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008795 (4e-50) |
| Best Drosophila hit | crooked legs, isoform B (2e-27) |
| Best Human hit | PREDICTED: zinc finger protein 729 (1e-36) |
| Best NR hit (blastp) | hypothetical protein BRAFLDRAFT_58764 [Branchiostoma floridae] (2e-57) |
| Best NR hit (blastx) | PREDICTED: similar to mCG7830 [Acyrthosiphon pisum] (4e-67) |
| GeneOntology terms | GO:0005634 nucleus GO:0046872 metal ion binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type |
| Orthology group | MCL20866 |
Nucleotide sequence:
ATGGAATTTGACGAGATCGTCGTCAAAGACACGCCCGGTTTGTGCCGGTGTTGTTTGTCT
GAAGGATGTTACAAGGACTTGAGCACTGAGTATCCTTGGATGGACGACACCGAAATATAC
GCCGATATGTTGTTGGAATGCTTTGATGTTAGCATATCCCAGCACATTGAAGGTCCAAAC
GGCCCCAACCGATTAATTTGTGAAGTGTGCATCACAAGGCTGAGAGATGCATGTAATTTT
AAAAAACAAGTACTGGATTCGGAGAAGAAGTTTATAGACATGGTTGGTCGTGGTGCATTT
AAAACTAAAGTTCTGCTGTATCCGGAACAGATGAAGTCGGAGAGTCAGGAAGTGGCAGCC
GATGAAGCAGAGATTGAATATCTTGATGAGGACGTCGATTATGATGATATACCACTCAAC
GAACTGGCAACACCGTCGGTATCAGAAGACATAACAGTGGCAACGTTACCAGTAGCGAAA
CGGGGTAGACCAAAAAAGACCATGAAAAATGAGAAGAAAAAAATTGATGTGAAATTAAAG
ACCAAATCAAAAGGTTCAATGCCAAAGATGGCGTCTGAGGCATTGAGTAAGTCCTTGACA
GCGACAAAGCTGAATAGGCTAGTGAAACTGAACGCTATAGCGGTCCTGGAGTGCTCCAAA
GTGGTGCCATTCAAATGGCACCGGCACAGCTATTTGTGTTTTTATTGCCATCTGAGTTTC
AAAACTATACAAACCCTGAAAGATCACACTAGCGACGGACACAAAGACTCCAACGTGAAA
TCAGCTGTTTCATATTTGAAAAGCGATGAGAAAGTCAAAATTGATATTTCCAATATGGGA
TGCCGTATATGTGATGATGATTTCGATAGACTGGATGATCTGATCGAACACTTGGGGACG
GTTCACGGCAGGTCGTTCTATGATGGTCACGGCTATGGCTTGATCCCTTACAAATTGTCG
GACGACAGATACGCTTGCGCTATCTGCAAGCAGGTTTTCCAGTACTTCATCAAGCTGAAC
CAGCACATGAACGAGCACTACGGTAATTTCGTGTGCGACGTCTGCGGCAAGTCTTTTCTG
AATAAGGACAGACTGCGCTGTCACATAAGGAGTCACGGTTCCGGTTTTCAGTGTGCTCTC
TGTTTGGAGAATTTCGATTCTCTAACCCAAAAAATTAATCACGAATCCTCGATACATAAT
AAGAAACGCATAATAAGATGCAATTTTTGCCCGCAAACTTTCAATAACTATTCGTTGCGT
AAAGTTCATCATAGTGCTGTTCACAATGTTGCCATATCAGTCACAAATTGCCCGGTCTGT
GGTAAAAAATTCCATATAGCCAGCAAAATGTGGTCTCACATGAAGGAAGTTCACGTCAGG
GAGAAGAATTTCTCGTGCAGTCTCTGCGAACAGAGATTCTTTTCTCGCACTCACGTCCAG
AAGCACATGATCAAACATATAGGAGAAAAAGTCCATAAGTGCGACGTATGCAAGAAGTCT
TACGCTAGGAAACAGACCTTGAGAGATCACGTGAGGATCCATCACAACGACAAAAAACAC
GTGTGCTCGATATGTGGCCACGCCTTCGTGCAACATAACAGTAAAAATCAAAAAGGCTGT
CAATCGTCGTCAATGCGTAGGAGAAAGAATCTTCAGATGTTGTTTAATAACACCACAGTG
ATACCCTTCAAATGGAGAGGGAAATATCTCTGTTTTTATTGCAGCAAAAATATAACGGAC
TATTCGGAGTTACGTAAACATACAAAATCACATGGGCCTTGCTCCACTGACGATCACTCG
CTCAAAGTGTTAAAGGGTGGGAAGAATATGGAAATTAAAATTGACGTATCGGATATTTGT
TGTGAGGTTTGCAACGAAGAATTTAAAATTCTGGACGATGTATTGGATCATCTGTGCGCG
AAACATAAATTTGAATACGACAGAAGCGTGGAAATGGCGATTGAAGAGTATCGCTTAATG
GATTTAAGCTGTCTGATATGCAAAGAGAAATTCGCGTATTTCGGTTATTTAGTGTCCCAT
GTCAACAATCACCATCCGAAGAACTGTCTCATATGCGACAAATGCGAACAGAAATTCAAT
AAGAAAAGGGATTTATTTTCCCACATAAAAAACTACCATCGAGACGGAGGATACAAGTGC
GATATTTGTCCGCAGAACTTTAGTTCTCTAAATATCCTGCGGAAACATAGAAGCAATCGA
CATTTCACCAGATGCAACATCTGCCAGCTGAGATTGCCGTCAGCTGTTCTTAAACAGAAG
CATATAGAATTGGAACATCCTGATGACGGATCGTTGCAATGTGATACGTGCTATAAGGAC
TTCCACACTAAGCAAGGTCTTAAAATGCACTCGAGGAAATGTAAAGGCGATATCTTCGAC
GTTGCTATCAAGAAGGAGGAATGCGACGGTCTTGACATTGATCAGGAGGAGATAAAACGA
CCGAGTGTCAAACAGATCCGCGAAAACATCGTGATAGTCATAAATATGTCGACAGCTATA
CCGTTTAATTTCTACAAGAATAAATTCAATTGCTTCTACTGTTCCAAAGACTTCACCGAT
TCTGATTCAATGCGGGAACATACTATTATCGAGCATCCGATTTGCGATGTCAAAGAAAAG
TGTATTAGAAAATGCAGGGAATCGGTTGCTTGTGTGAAAATAGATATTTCGAGTTTAGCT
TGTAAGGTGTGCTTTGAAACGATGGATAGTTTAGACGTTTTGTTAGATCATCTCATAACG
AAACATGAAGCTAATTACGACAAATCTATCACGACTTGCCTCCAACCTTACAAACTCATA
AAAGATCATATGGCGTGCCCCAACTGTCCAACCGAGGTGTTCAGATTCTTTGGCACGTTG
CTTAAACACGTTAACAACAAACACACAGATAACAATATTATATGCGTGTATTGCGGGCAG
ACTTTTCGGCGAGATCAAAATCTACGCGTTCATATATGGAGACATCACAGGGACGGTAGA
TTCAAATGCAACATATGCGGTGCGGATTGCAATATACCGTCTAGGCTGTACATGCATATG
GCGAAAGCTCATGGCGTTAAAGCGGCGAAGTGTCCTAAATGCTCGGAATCTTTCGCCACC
CAGTATCTAAGGCAGAAGCATCTTATAGAAGCTCACGATTCTGGCCACAAGTGCACATAT
TGCGGCAAATTGTTTACGCGGAATTCATTTATGCGGGATCACATACGTCGGACGCATCTC
AAGGAGAAGAATGTCGAATGTTCGATTTGCAATATGAAGTTTTTCAACAATATTCTGTTG
CGACGTCACATGGTTAAACATAGCGGGGAGAAAAATTTTCATTGTGACATGTGTGGCGAA
CGATTTTATTGGAGGAAGAGCTTGAGAACTCACATGGCGAGGCACAGCAAGCATAATCCT
GTCACATAG
Protein sequence:
MEFDEIVVKDTPGLCRCCLSEGCYKDLSTEYPWMDDTEIYADMLLECFDVSISQHIEGPN
GPNRLICEVCITRLRDACNFKKQVLDSEKKFIDMVGRGAFKTKVLLYPEQMKSESQEVAA
DEAEIEYLDEDVDYDDIPLNELATPSVSEDITVATLPVAKRGRPKKTMKNEKKKIDVKLK
TKSKGSMPKMASEALSKSLTATKLNRLVKLNAIAVLECSKVVPFKWHRHSYLCFYCHLSF
KTIQTLKDHTSDGHKDSNVKSAVSYLKSDEKVKIDISNMGCRICDDDFDRLDDLIEHLGT
VHGRSFYDGHGYGLIPYKLSDDRYACAICKQVFQYFIKLNQHMNEHYGNFVCDVCGKSFL
NKDRLRCHIRSHGSGFQCALCLENFDSLTQKINHESSIHNKKRIIRCNFCPQTFNNYSLR
KVHHSAVHNVAISVTNCPVCGKKFHIASKMWSHMKEVHVREKNFSCSLCEQRFFSRTHVQ
KHMIKHIGEKVHKCDVCKKSYARKQTLRDHVRIHHNDKKHVCSICGHAFVQHNSKNQKGC
QSSSMRRRKNLQMLFNNTTVIPFKWRGKYLCFYCSKNITDYSELRKHTKSHGPCSTDDHS
LKVLKGGKNMEIKIDVSDICCEVCNEEFKILDDVLDHLCAKHKFEYDRSVEMAIEEYRLM
DLSCLICKEKFAYFGYLVSHVNNHHPKNCLICDKCEQKFNKKRDLFSHIKNYHRDGGYKC
DICPQNFSSLNILRKHRSNRHFTRCNICQLRLPSAVLKQKHIELEHPDDGSLQCDTCYKD
FHTKQGLKMHSRKCKGDIFDVAIKKEECDGLDIDQEEIKRPSVKQIRENIVIVINMSTAI
PFNFYKNKFNCFYCSKDFTDSDSMREHTIIEHPICDVKEKCIRKCRESVACVKIDISSLA
CKVCFETMDSLDVLLDHLITKHEANYDKSITTCLQPYKLIKDHMACPNCPTEVFRFFGTL
LKHVNNKHTDNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGADCNIPSRLYMHM
AKAHGVKAAKCPKCSESFATQYLRQKHLIEAHDSGHKCTYCGKLFTRNSFMRDHIRRTHL
KEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDMCGERFYWRKSLRTHMARHSKHNP
VT