| New model in OGS2.0 | DPOGS208159 |
|---|---|
| Genomic Position | scaffold3108:- 7439-17401 |
| See gene structure | |
| CDS Length | 2673 |
| Paired RNAseq reads | 958 |
| Single RNAseq reads | 2609 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014067 (3e-58) |
| Best Drosophila hit | CG15160 (2e-62) |
| Best Human hit | regulation of nuclear pre-mRNA domain-containing protein 2 (7e-30) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (3e-94) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (9e-82) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR006903 Domain of unknown function DUF618 IPR008942 ENTH/VHS IPR006569 RNA polymerase II, large subunit, CTD |
| Orthology group | MCL16088 |
Nucleotide sequence:
ATGGGTGAAACCGAAGAATTCAATACTTTAGCGTTCGAAAAGAAACTCACACAGCTGAAG
GATACACAGGAAAGTATCCAGTCTCTATCTAGCTGGTGTTTGAAACAAAGAACTCACCAT
AAAAAGATAGTTTCCAGTTGGTTGAATGTGTTGAAGAGAGTGAAGGTGGAACAGCGACTT
GTGTTGTTTTATTTAGCTAACGATGTTATTCAATATAGCAAAAGGAAAAATTACGAGTTT
GTTGAAAGCTGGGGTCTTAATTTGCAAAAAGCTACACCACTAGTCAGAGATGAGAAAGTT
AGACCGAAGATATTGAGGATATTCAAAATCTGGGAACAAAGATCAGTTTATGATGATGAG
TTCTTATCAGATCTCACAGGTCTACTGAGTGCGGGGGCTGTTAAAAAGACTGATGACGAT
CCATTGGATTTTCAACCTCAACAGTTGGTCAACAAGATAAGACAGTGTACTGTGCTAGAA
GCGGATACTCAGGTGAAATTGAAATGTATTTGTAACAGTCCATTAGAATTGTCGGATACG
GATGCATTATGTTCAAATTTAAAAGAGAGAAGTAGCAAGGATGACGTAGAAAAGGAACTC
AATGAAGGCATACAATGTGTGGAACGATACACTCAAGCATTACAGAGGGAAATAGTTGCT
AGGGAGGCATTACTAGCATTGTTGAGTTCAGCAAACCAATACTACTCTACGCAGAGGGGA
GAAGTGAAAGTTGTGGCATATGCATACAAAAACTTCGGTTCCCGAGTGCGCGCTCTCAAA
CGCAAGTTAGATGAATTGTTGCCAACACTACCGAGTGCACCGTCGCCGCCGACTAGAGAT
GAAGACGTACCCTCACCTGGACCGGACGAGGATTTGGAACTACCCACCAATGAAAATGAA
GTATCATACAACATCGACCAAACCTTCAATACATCGGTGTCAGCTGATGGGTCCTTGTAT
AACTTGGGACTATCGTCGTTCCTCAACGAAAACTCCATGGCTATATTCAATGAAAGCCAA
GCGGATTTAAATATTGTTAATAGCAGCATACAGCCAGATACGCTTCCGGGATTGGACCTC
CTTAAGGAATCCAACCCTCCACCACCGACATCATTCTACGGGACCATGGAAACTATCACT
AAGAGAAGTAGCAAGGATGACGTAGAAAAGGAACTCAATGAAGGCATACAATGTGTGGAA
CGATACACTCAAGCATTACAGAGGGAAATAGTTGCTAGGGAGGCATTACTAGCATTGTTG
AGTTCAGCAAACCAATACTACTCTACGCAGAGGGGAGAAGTGAAAGTTGTGGCATATGCA
TACAAAAACTTCGGTTCCCGAGTGCGCGCTCTCAAACGCAAGTTAGATGAATTGTTGCCA
ACACTACCGAGTGCACCGTCGCCGCCGACTAGAGATGAAGACGTACCCTCACCTGGACCG
GACGAGGATTTGGAACTACCCACCAATGAAAATGAAGTATCATACAACATCGACCAAACC
TTCAATACATCGGTGTCAGCTGATGGGTCCTTGTATAACTTGGGACTATCGTCGTTCCTC
AACGAAAACTCCATGGCTATATTCAATGAAAGCCAAGCGGATTTAAATATTGTTAATAGC
AGCATACAGCCAGATACGCTTCCGGGATTGGACCTCCTTAAGGAATCCAACCCTCCACCA
CCGACATCATTCTACGGGACCATGGAAACTATCACTATTCCTGATGAACCCGATCAACCT
TATCTACCAGAAGCTGTGGTCACAAACAGTCAATGGGCAAATAATACTTGGAATGTGCCT
CTTCCAGTGGCACGTAACGTGTTCGCGGAGCCCCCAGCCTCACCGCCCGTGCCGATACGA
ACAGACACACAGGTGGATATTTCCGCGTCTGATCATGAGCTTCGCAGCCGCCTGCCACCA
CCGCCACCGCCTCCTGTACTGCCAGGTCTTACACATATCGAGGATGTAGATCACAGGCTA
CTGCCAAGTCTACCTCCGACGCCCGTACCTCCGCCTATACGTCATTCACATCAAGATGTG
GATCACAGGAATCTTATATCACTGACACAACTACCTCCCAGACATGTTAATGTAGATCAA
GACTACCGCCTACCTCCACTGTCTCAGCCCCTGGGTGTGCCTCTCCTGCCACCTCCGCCT
TCAGACATTGTTGAGAGTGTCGATATGGACCTATCAGAGGACGAAGAGCAAGGTATGTAC
CAGACACAGAATCAAAGCGATCACAGACACAACAGCTTTAACAACAATAAAGTACTGGTC
GGTGGTGAGAAGAAGGACAACAGTAATCTCATACAGATAAACGCTAATATAGACATCGAG
GCCCCCCACGGAACCCCCGTGGCCCCCATGACGAACCCCTTCGACAACATGCCCCCCCAA
CTACGATACAACTTCAATACCAACTATCAAAAGAATCCAGATAACGCCGAATATAATGAT
GATATAAGAAATCGTAACCTCGATAGAAGAAATCAATCGCCTGAGTACGAAGATTATAAG
AGTAACGATTTCCAGGCCCCCCGGCCTTATATGAACCGGTTCCCGAGGAATTGGGGGCCT
CGCAATAACTTCAGGGCCCCATATAATCAGTTCAATCAGCGCAACGGCGGCCCTCGACAA
CGATGGGGCGGGCCCAGGCAAAGGTTTTGGTGA
Protein sequence:
MGETEEFNTLAFEKKLTQLKDTQESIQSLSSWCLKQRTHHKKIVSSWLNVLKRVKVEQRL
VLFYLANDVIQYSKRKNYEFVESWGLNLQKATPLVRDEKVRPKILRIFKIWEQRSVYDDE
FLSDLTGLLSAGAVKKTDDDPLDFQPQQLVNKIRQCTVLEADTQVKLKCICNSPLELSDT
DALCSNLKERSSKDDVEKELNEGIQCVERYTQALQREIVAREALLALLSSANQYYSTQRG
EVKVVAYAYKNFGSRVRALKRKLDELLPTLPSAPSPPTRDEDVPSPGPDEDLELPTNENE
VSYNIDQTFNTSVSADGSLYNLGLSSFLNENSMAIFNESQADLNIVNSSIQPDTLPGLDL
LKESNPPPPTSFYGTMETITKRSSKDDVEKELNEGIQCVERYTQALQREIVAREALLALL
SSANQYYSTQRGEVKVVAYAYKNFGSRVRALKRKLDELLPTLPSAPSPPTRDEDVPSPGP
DEDLELPTNENEVSYNIDQTFNTSVSADGSLYNLGLSSFLNENSMAIFNESQADLNIVNS
SIQPDTLPGLDLLKESNPPPPTSFYGTMETITIPDEPDQPYLPEAVVTNSQWANNTWNVP
LPVARNVFAEPPASPPVPIRTDTQVDISASDHELRSRLPPPPPPPVLPGLTHIEDVDHRL
LPSLPPTPVPPPIRHSHQDVDHRNLISLTQLPPRHVNVDQDYRLPPLSQPLGVPLLPPPP
SDIVESVDMDLSEDEEQGMYQTQNQSDHRHNSFNNNKVLVGGEKKDNSNLIQINANIDIE
APHGTPVAPMTNPFDNMPPQLRYNFNTNYQKNPDNAEYNDDIRNRNLDRRNQSPEYEDYK
SNDFQAPRPYMNRFPRNWGPRNNFRAPYNQFNQRNGGPRQRWGGPRQRFW