| New model in OGS2.0 | DPOGS208853 |
|---|---|
| Genomic Position | scaffold279:+ 30796-34801 |
| See gene structure | |
| CDS Length | 1230 |
| Paired RNAseq reads | 25 |
| Single RNAseq reads | 87 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012573 (2e-95) |
| Best Drosophila hit | CG42346 (2e-14) |
| Best Human hit | peroxidasin homolog precursor (2e-06) |
| Best NR hit (blastp) | PREDICTED: similar to leucine-rich transmembrane protein [Tribolium castaneum] (5e-32) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC000625 [Tribolium castaneum] (8e-33) |
| GeneOntology terms | GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL40759 |
Nucleotide sequence:
ATGGAATCTTTTGATGAGGATTTAAGTAATTTAAAGCTTTTAGATCTCTCCCACAATAAA
CTACAAAACATTTTGAATGAACATTTAATAAATTTAAAAGAATTAACTGTCCTTTATCTG
GCCTATAATAATATTAAATATCTATCAGCTACTTCTTTCAATAATCTTAATAAGATTGTA
AAAATAGATCTAGAACATAATAAACTTCAAACAATACCTTTGGAGTTACTCACATCAATA
GAAAATCATATACAAGACATCTCCATACAAGATAACGTTATAATCTGTCGTTGCCAAAAG
AACAACACGTGGACATGGATTCAAGATCATCCAAAAATAATAAAACAGTATGCCGTTACT
TGTTTTAATGAGGATTATCCCAAAGAAAAGTGTGATCTACCTTTTATCGTTCAGTTATCT
GCAGACAAACAGGATGATAATTCAGTTTTAATAACATGGCTTATCAGAAATCGTACTTCT
GTAAAAGCATTACATGTGCTATATTACAACGAAATCACCTTTTCTGACGTGAAATTAAAG
CACGTAGATCTGAATTCAACGTCTACTCTTATAACTGATTTGGAGCCGAATATGAATTAT
ATGGCATGTTTGCTAACGATGTATGATAATTCTGTCATCAATTTGTTGAATGAAGATTTC
ATAGGCATCAACAGGACGGATTTTGAAACTAACATTACTGCAAAAATGAATCGTAATATA
GCGGCGTCACTGATTGCACAGTCTACAGCAAGTGAATGTGTTACTTTTGACACGATAAAA
AAACCACTGATAATTAAAACAAAAAGTGGCAAAGATTACAAAACTTCGTCTATATTAAAT
CGTCGCACTGGCTTGATTGTTGGCTGTTCACTAGGATTCATAGTGTTCTTCGTAATGCCC
GGCTTCACCGGGCTGCCCACAACCCCGCATTCCATCCGACATAGAATGCTCGGAATCTCA
TTGGAGACTTCTTCGCTGATCTTGGACGCCCAGGAGGATAACGACGGGTTCAGGCCCGTT
ATCCAAATCGGGAAAGAGGAAGGCGGCAAAGTTGCTGAAGGCACCGCCGCCTATTACAAA
AGTAGCGATGTGACCCGCAGCTGCCGGCGCAACTGCCTGCGCACCTGCGGACCTATCTGT
CTTTGCACCGGCGGGCACATCTGTGTCCGCACCGACGCCCGCACCTATTCGCGCAGCTGT
GGCAAAAACCCAATCGACCACCGCGAATAA
Protein sequence:
MESFDEDLSNLKLLDLSHNKLQNILNEHLINLKELTVLYLAYNNIKYLSATSFNNLNKIV
KIDLEHNKLQTIPLELLTSIENHIQDISIQDNVIICRCQKNNTWTWIQDHPKIIKQYAVT
CFNEDYPKEKCDLPFIVQLSADKQDDNSVLITWLIRNRTSVKALHVLYYNEITFSDVKLK
HVDLNSTSTLITDLEPNMNYMACLLTMYDNSVINLLNEDFIGINRTDFETNITAKMNRNI
AASLIAQSTASECVTFDTIKKPLIIKTKSGKDYKTSSILNRRTGLIVGCSLGFIVFFVMP
GFTGLPTTPHSIRHRMLGISLETSSLILDAQEDNDGFRPVIQIGKEEGGKVAEGTAAYYK
SSDVTRSCRRNCLRTCGPICLCTGGHICVRTDARTYSRSCGKNPIDHRE