| New model in OGS2.0 | DPOGS203555 |
|---|---|
| Genomic Position | scaffold12165:- 533-2630 |
| See gene structure | |
| CDS Length | 393 |
| Paired RNAseq reads | 219 |
| Single RNAseq reads | 4811 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004251 (7e-29) |
| Best Drosophila hit | ornithine decarboxylase 1 (1e-16) |
| Best Human hit | ornithine decarboxylase (1e-18) |
| Best NR hit (blastp) | ornithine decarboxylase [Spodoptera litura] (2e-36) |
| Best NR hit (blastx) | ornithine decarboxylase [Bombyx mori] (6e-36) |
| GeneOntology terms | GO:0001822 kidney development GO:0004586 ornithine decarboxylase activity GO:0005515 protein binding GO:0005829 cytosol GO:0006595 polyamine metabolic process GO:0008152 metabolic process GO:0008284 positive regulation of cell proliferation GO:0009446 putrescine biosynthetic process GO:0009615 response to virus GO:0016829 lyase activity |
| InterPro families | IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site IPR002433 Ornithine decarboxylase IPR000183 Ornithine/DAP/Arg decarboxylase IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal |
| Orthology group | ND |
Nucleotide sequence:
ATGAACTTTGACATTTGTAAGCTGACCCTTGTGGACTGGCCAGCTCTCACCCACCTGACA
CCCGCACCGCACCATAACCGAACCATGAAGGTAACCGAGCAGCACGTCACAGTGATGAAG
GGTCCCTGGAGCCCGGCGTCCGTGGCCAGGGACACGGTGGACCGCGGGCACGAGGAACCC
TTCTACGTCATGGACCTGGGAGAGGTGGTCCAGAGGTACAACACCTGGAAGGAGCTGATG
CCGCGCGTCGAACCGTTTTATGCTGTGAAATGCAACGACGACAGGTTGTTGGTGAGCACG
CTGGCGGCTCTGGGCGCCGGCTTCGACTGCGCCTCCAAGGCTGAGATAGAACTCGTCACC
AGCCTCGGAGTCACACCAGAGTTAGTAACATAA
Protein sequence:
MNFDICKLTLVDWPALTHLTPAPHHNRTMKVTEQHVTVMKGPWSPASVARDTVDRGHEEP
FYVMDLGEVVQRYNTWKELMPRVEPFYAVKCNDDRLLVSTLAALGAGFDCASKAEIELVT
SLGVTPELVT