| New model in OGS2.0 | DPOGS215758 |
|---|---|
| Genomic Position | scaffold1525:- 11639-19635 |
| See gene structure | |
| CDS Length | 2694 |
| Paired RNAseq reads | 1696 |
| Single RNAseq reads | 4563 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003635 (0.0) |
| Best Drosophila hit | transportin, isoform C (0.0) |
| Best Human hit | transportin-1 isoform 2 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to transportin 1 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to transportin 1 [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0008139 nuclear localization sequence binding GO:0044419 interspecies interaction between organisms GO:0005634 nucleus GO:0008565 protein transporter activity GO:0000060 protein import into nucleus, translocation GO:0005515 protein binding GO:0005737 cytoplasm |
| InterPro families | IPR001494 Importin-beta, N-terminal IPR011989 Armadillo-like helical IPR016024 Armadillo-type fold IPR000357 HEAT |
| Orthology group | MCL10823 |
Nucleotide sequence:
ATGGAGTGGAAACCTGAACAAGAAGGATTAAGACAAATATTAACACTACTAAAGGAGTCT
CAGTCACCGGACACTGCTACTCAGAGAGCAGTTCAACAAAAATTGGAAGAATTAAACAAA
TACCCAGATTTCAACAACTACTTAATTTTTGTACTAACAAAACTAGTTTCGGAAGAAGAA
CCGACGAGGTCTTTGAGTGGTCTTATTTTGAAGAACAATGTCAAAGCGCGCTACAACAGC
TTTTTACCCGAGGTTGCGGAGTTCATAAAGCGAGAATGTTTATCAGCGGTTGGAGATCCG
TCGCCGTTGATTAGAGCGACTGTTGGCATTATAATAACAACCATTGCTAGTAAAGGTGAA
CTTACTTCATGGCCTGAGTTATTACCAGCATTATGCCAAATGCTTGATTCACAGGACTAC
AATGTTTGTGAGGGTGCTTTTGGAGCGCTTCAGAAGATTTGTGAAGACACAGCAGAATTG
TTAGACAGTGATGCTTTAAACCGGCCATTAAATGTATTGATCCCTAAATTTCTCCAGTTT
TTTAGACATTCATCACCCAAAATTAGATGTCATGCCATCGCTTGTGTCAACTATTTCATC
ATGGGCAGAACACAAGCTCTCATGTTACACATAGATTCTTTTATTGAGAATTTATTCCAT
CTAGCAGCTGACGAAGATCCCGATGTAAGAAAAAATGTTTGTCACGCTTTAGTGCTGCTA
TTAGAAGTTCGTTTGGACAGACTGATTCCATACTTACCAAACATTATTGAGTACATGTTA
ATGCGCACACAAGACGCTGAAGAAGGTGTAGCTTTAGAAGCATGTGAATTTTGGTTGTCG
CTTGCAGAGCAAAATGTTTGCAGAGAGGTTTTAGGGCCACGGTTGCCATCCCTACTGCCA
GTGTTGGTCCGAGGAATGAGGTATTCAGAAATGGATGTGATTCTACTGCGAGGTGATCGT
GATGATGATGCCGATGACGCTGAGCCCGACAGAGAATCAGATATTAGACCGCGCTTCCAC
AAACCACGCTCACACACCATCAAACATAATGCAGGTGCGGGTGACAGTAATATGTCAGGC
GGTGGCGAGTCTGATGATGAAGAGGAAGGCGGAGACGACGACGGCTCCCTGTCTGACTGG
AACCTTCGCAAGTGTTCAGCCGCAGCCCTAGATGTACTAGCCAATGTGTTCGGAGCCGAT
TTACTGCCAGTACTATTCCCTATACTCAAGGAGACGTTGTTCCACGATGATTGGGTCATC
AAGGAAAGTGGCATCCTAGCATTGGGTGCTGTAGCGGAAGGATGCATGGGCGGTATGGTA
CCTCACCTGCCGGACTTGGTTCCGTACCTCGTGTGTTGTTTAGCTGAGAGGAAGGCTCTA
GTGCGAGCTATCACCTGCTGGACCCTGTCGAGATACTCACATTGGATAGTCAGCCAGTCA
CACGATCTGTACCTTAGACCCGTTATGACAGAGCTCCTAAAACGTGTCCTGGATAACAAC
AAACGAGTACAAGAAGCCGCTTGTTCGGCGTTCGCCACATTAGAGGAGGAAGCCTGCACA
GAATTAGTACCGTACTTAGGACATATCCTACAGACATTAGTGTACGCGTTCAGTAGATAT
CAACACAAGAACCTATTAATATTGTACGACGCAATCGGCACACTAGCCGATTCTGTGGGA
CATCACTTAAACAAACAAGAGTACATTGACCTTTTGATGCCACCTCTGATTACTAAGTGG
AATGTATTAAAAGACGAAGACAAAGATCTGTTTCCTCTACTAGAGTGTCTGTCATCTGTA
GCGACAGCATTACAGTCAGGATTCCTGCCATACTGTGAACCGGTGTTCAGACGATGTGTG
TCCCTCATAGAACAGACATTGAATCAAAACATTGCAAACAGTCAAAGCCCTGAACAGTTT
GATGCACCGGACAAGGACTTCATGATAGTGGCACTGGATCTGCTGAGCGGCCTGACCGAG
GGTCTGGATGGACACATCAACCACCTTGTGCTGAACTCCAACTTAATGCAGCTTCTGTAT
CAATGTATGCAGGATCCTATGCCGGAGGTCCGTCAGTCGTCGTTCGCGTTACTGGGAGAT
CTGACTAAGGCGTGCTTTCAACACGTTCTGCCATACATACCGGAGTTCCTGCCCATCCTG
GGAATGAACCTCAACCCAGAATTCATTTCGGTGTGCAACAACGCCACTTGGGCCATCGGC
GAGATTAGCATTAAGTTAGGAGCAGAGACCTCAAAATATATACCGCTTGTACTGAACCAT
TTAGTGGACATCATCAACCGGCCGAACACACCAAAGACCTTACTCGAAAACACAGCGATA
ACTATTGGTCGGCTAGGTTATGTGTGCCCCCACGACGTCGCACCCGTTTTACATCAATTT
GTACGCCAGTGGTGTACGTCACTGAGGAACATCCGGGATAACGACGAGAAGGATTCAGCG
TTCCGCGGCATCTGTCAGATGATCCAAGTGAATCCGGCGGGGGTGGTGCCCGACTTTATG
TTCTTCTGTGACGCCGTGGCTTCATGGACGCATCCCAAGGACGACCTCAAGGAGATGTTT
ACGAAGATCCTCCACGGGTTCAAGAACCAGGTCGGAGAAGACAACTGGCGACGTTTCACC
GACCAGTTCCCGGTACAGCTCAGCGCCCGCCTCTCCGCCATGTGCGGGATATAG
Protein sequence:
MEWKPEQEGLRQILTLLKESQSPDTATQRAVQQKLEELNKYPDFNNYLIFVLTKLVSEEE
PTRSLSGLILKNNVKARYNSFLPEVAEFIKRECLSAVGDPSPLIRATVGIIITTIASKGE
LTSWPELLPALCQMLDSQDYNVCEGAFGALQKICEDTAELLDSDALNRPLNVLIPKFLQF
FRHSSPKIRCHAIACVNYFIMGRTQALMLHIDSFIENLFHLAADEDPDVRKNVCHALVLL
LEVRLDRLIPYLPNIIEYMLMRTQDAEEGVALEACEFWLSLAEQNVCREVLGPRLPSLLP
VLVRGMRYSEMDVILLRGDRDDDADDAEPDRESDIRPRFHKPRSHTIKHNAGAGDSNMSG
GGESDDEEEGGDDDGSLSDWNLRKCSAAALDVLANVFGADLLPVLFPILKETLFHDDWVI
KESGILALGAVAEGCMGGMVPHLPDLVPYLVCCLAERKALVRAITCWTLSRYSHWIVSQS
HDLYLRPVMTELLKRVLDNNKRVQEAACSAFATLEEEACTELVPYLGHILQTLVYAFSRY
QHKNLLILYDAIGTLADSVGHHLNKQEYIDLLMPPLITKWNVLKDEDKDLFPLLECLSSV
ATALQSGFLPYCEPVFRRCVSLIEQTLNQNIANSQSPEQFDAPDKDFMIVALDLLSGLTE
GLDGHINHLVLNSNLMQLLYQCMQDPMPEVRQSSFALLGDLTKACFQHVLPYIPEFLPIL
GMNLNPEFISVCNNATWAIGEISIKLGAETSKYIPLVLNHLVDIINRPNTPKTLLENTAI
TIGRLGYVCPHDVAPVLHQFVRQWCTSLRNIRDNDEKDSAFRGICQMIQVNPAGVVPDFM
FFCDAVASWTHPKDDLKEMFTKILHGFKNQVGEDNWRRFTDQFPVQLSARLSAMCGI