| New model in OGS2.0 | DPOGS203517 |
|---|---|
| Genomic Position | scaffold1045:+ 20424-24826 |
| See gene structure | |
| CDS Length | 1347 |
| Paired RNAseq reads | 448 |
| Single RNAseq reads | 1026 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004347 (3e-148) |
| Best Drosophila hit | CG8833 (6e-73) |
| Best Human hit | G patch domain-containing protein 1 (5e-59) |
| Best NR hit (blastp) | PREDICTED: similar to CG8833-PA [Apis mellifera] (1e-87) |
| Best NR hit (blastx) | GK12430 [Drosophila willistoni] (8e-77) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR000467 D111/G-patch IPR011666 Domain of unknown function DUF1604 |
| Orthology group | MCL13275 |
Nucleotide sequence:
ATGAGTGGATCAGATTCCGAAGAAGAAAACACCTTGCGCTATGGAACACCGTTGGAACCA
TACGAAGAAGATGAACTACCATCGAAAAAGAAGTATCAACCTCAGGAGCAATATGCGGTG
GATGAGCATGGAAAGCGCCGCTTTCACGGTGCATTCACTGGTGGATTCTCAGCTGGGTTT
GGTAATTCAGTCGGTACACCAGAAGGATGGACACCAAGCTCGTTTAAGAGTTCACGAGCT
GAGAAAGCACTAATTGCTAACCAAAGACCTGAAGATTTCATGGATGAAGAAGATCGCTCT
GAGTTCGGTATAGCACCTCGCAGCTTGCAAGCCAACCAAGAGTTCACGGGACAGAAGCGG
ACGAGAACTAGTTACTATGACGGCACCATACCGGGAGTTCCAGTACTGGAGCAGCTTCTA
CGACCGGTCCATGAAACAACGGCTGTGAAGATTCTACGGAAGATGGGATGGAGGGATGGC
CAGGGGGTCGGAGACAGAGTCACTAGGACGGAGAAGAAGAAAACAAACAAGCAACATAAA
GTGTACGGGTGTTACATGCCAGATGATATGAGACAGGTCAGCCGGGAATCGGATAGCTCG
GAATCGGAGTTCGAGTACGAGCAGCTGTTCGCGCCGGACGATTATGAGCCTTATGTGTTA
AAGAATAAGAACGATAAATTCGGTCTGGGATATGAAGGGCTGAGTCGGCACTCGGTGCTG
GGGAATATGGTCGGGGAGTACGACGCTGGAGGATCCAAGAGCCACCTCCTCATGAGGGAT
AAGGGCAGGAAGGTGTCGATCCGCGGCCAGGCGTTCGGGGTTGGCGCCTTCGAGGCTGAT
GACGAAGATATATACAGCAGAGAGGACATGACGCATTACGACTACGAGATGGGACCGGAA
GTGACGACGAAGAAGCACGTCGCTAAACAGCAAAATAATGTGCTCCAGGGTTTCGTTAAG
TCCAAGGCTAAACCGCCGTCGGTGGCCTCGTACCCCCCGCCCACTCTGCCACGGGGCTAT
GTCCCAGCAACCAGACGCTCAAGATTCGACGAGAGTAGGCCTCCGCAGAGGGACCAAGGT
CTCGGACGACATGAACTGACATCAGCGGCGAGAGGAGCTCTCTTAGGAGAGACGCCCGTG
GACAGCGCAGAACACACACAACGCAAGGAGCCGGAGCCGCAGGCCGCGTCTGACACGAAG
ATAGTTGGAATAGTTACAGACATCACCGTCCCGCCGGACGCCGGGGAGCTGAATTACATA
TCGATAAAAAATACAGACAAATCCAATCTGAAGGTTTTCAAGCCGTTCGCCAGCGACCCT
CAGAAGCAGCTGAGATATGAGAGGTAA
Protein sequence:
MSGSDSEEENTLRYGTPLEPYEEDELPSKKKYQPQEQYAVDEHGKRRFHGAFTGGFSAGF
GNSVGTPEGWTPSSFKSSRAEKALIANQRPEDFMDEEDRSEFGIAPRSLQANQEFTGQKR
TRTSYYDGTIPGVPVLEQLLRPVHETTAVKILRKMGWRDGQGVGDRVTRTEKKKTNKQHK
VYGCYMPDDMRQVSRESDSSESEFEYEQLFAPDDYEPYVLKNKNDKFGLGYEGLSRHSVL
GNMVGEYDAGGSKSHLLMRDKGRKVSIRGQAFGVGAFEADDEDIYSREDMTHYDYEMGPE
VTTKKHVAKQQNNVLQGFVKSKAKPPSVASYPPPTLPRGYVPATRRSRFDESRPPQRDQG
LGRHELTSAARGALLGETPVDSAEHTQRKEPEPQAASDTKIVGIVTDITVPPDAGELNYI
SIKNTDKSNLKVFKPFASDPQKQLRYER