| New model in OGS2.0 | DPOGS203517 |
|---|---|
| Genomic Position | scaffold1045:+ 24938-26540 |
| See gene structure | |
| CDS Length | 1278 |
| Paired RNAseq reads | 319 |
| Single RNAseq reads | 933 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004347 (3e-95) |
| Best Drosophila hit | CG8833 (8e-22) |
| Best Human hit | G patch domain-containing protein 1 (8e-14) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL008583 [Aedes aegypti] (2e-23) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL008583 [Aedes aegypti] (5e-27) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | ND |
| Orthology group | ND |
Nucleotide sequence:
ATGACCGTCCCGCCGGACGCCAGGGAGCTGAATTACATATCGATAAAAAACTCAGACAAA
TCCAATCTGAAAGTTTTCAAGCCGTTCGCCAGCGACCCCCAAAAGCAGCTGAGATATGAG
AGGTACTTGGAGATGAAGCCAGAGAGGGAAGGCGCTAGCGATAGATTGACTCAGTGGGAG
AGGGACAGAGAGATGGCGGAGTTCGAGCAGGCTGCGAAACTGTACAAGCCGTTGAGCGGC
GTCATGGGCGACAGATTCACCCGCGCCTCCGAACCCGACGACGCTTTGAATCCTCTGTGT
GCGGTCGCCAAGAGTTCCATCAACTACGGCCTAGCAAGTCCCGAAATGATTGAGGCTGCG
AAAAAAGGCGCGTATGGTGTCATGACAAGAAAAGAAGTGTCATGGCGACCGGAAACGCTG
GTCTGTAAAAGATTCAATGTACCGGAAATTGGTGCCAGACTTGAAGAATCCAAAGAAGAT
AAGCCAAAAGTGTCATATTCAATATTCTCCTACATGGAATCGTCGGTTCACAGCAGGGAG
AGCTTCACTCAGGAACAGAGCAAGTTCTCCGGTTCCAAGTCCTTAAATATGGAACATAAA
GCCAAGAAACCTGACAAGGATGAGGAAAAACAGGAAAATATAAACAAAGACAAAGAAATA
AATACATCGAAGAGATTGACGGTCGCGGAACTGTTTATAAGGGAATCCGAAAAAGATTTG
AACGGGAGGGACAAAGAGGTGGCGCAGACTATCGAGAAGTTTGATAAGATCGATTTGTAC
AAATCGATTTTTCTAAGCGACAGCGAGGACGAAGAGACCGACAAAAATGATCCGGCCGAT
ACGAACAGAAATATGGAACGGAACAATTCACCGGCGAGGGGAATCTTCGCTAACATAGAC
TTCGACGAACTCAACGCTTGGAGAAGAAACGCAGACAGGCGGACGGACAGAGACACGGGT
AGCAAAGACACGGACAGCAAAGACACGGGTAGCAAAGACACGGACAGCAAAGACACGGGT
AGCAAAGACACGGACAGCAAAGACACGGGTAGCAAGATGTACGGGCCGAAGATCCCAGAA
AACTTGCAAAAGAGACTGGAGGTGCCGGCGAAAGATAACTTTAAACCAGTTTATAGAAGT
AAAGATAAAAGGGACGAGTCCTCGTCGAGCTCGGAGTCGTGGGTCGAGGCGGGCGCGAAG
CAGAAGAAAGAAAAGAAAAAGAAAAGCAAGAAGCACAAGTCGAAACACAAGAAGAAACAC
AAAAAGAGGGATAGGTGA
Protein sequence:
MTVPPDARELNYISIKNSDKSNLKVFKPFASDPQKQLRYERYLEMKPEREGASDRLTQWE
RDREMAEFEQAAKLYKPLSGVMGDRFTRASEPDDALNPLCAVAKSSINYGLASPEMIEAA
KKGAYGVMTRKEVSWRPETLVCKRFNVPEIGARLEESKEDKPKVSYSIFSYMESSVHSRE
SFTQEQSKFSGSKSLNMEHKAKKPDKDEEKQENINKDKEINTSKRLTVAELFIRESEKDL
NGRDKEVAQTIEKFDKIDLYKSIFLSDSEDEETDKNDPADTNRNMERNNSPARGIFANID
FDELNAWRRNADRRTDRDTGSKDTDSKDTGSKDTDSKDTGSKDTDSKDTGSKMYGPKIPE
NLQKRLEVPAKDNFKPVYRSKDKRDESSSSSESWVEAGAKQKKEKKKKSKKHKSKHKKKH
KKRDR