New model in OGS2.0 | DPOGS200146  |
---|---|
Genomic Position | scaffold2269:+ 65-776 |
See gene structure | |
CDS Length | 303 |
Paired RNAseq reads   | 56 |
Single RNAseq reads   | 342 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002939 (6e-30) |
Best Drosophila hit   | photoreceptor dehydrogenase, isoform B (4e-13) |
Best Human hit | 15-hydroxyprostaglandin dehydrogenase [NAD+] isoform 1 (2e-08) |
Best NR hit (blastp)   | putative alcohol dehydrogenase [Bombyx mori] (4e-17) |
Best NR hit (blastx)   | putative alcohol dehydrogenase [Bombyx mori] (3e-16) |
GeneOntology terms    | GO:0004022 alcohol dehydrogenase (NAD) activity GO:0055114 oxidation reduction GO:0005488 binding GO:0006911 phagocytosis, engulfment GO:0042574 retinal metabolic process GO:0004745 retinol dehydrogenase activity GO:0042572 retinol metabolic process |
InterPro families    | IPR016040 NAD(P)-binding domain IPR002424 Alcohol dehydrogenase, insect family |
Orthology group | ND |
Nucleotide sequence:
ATGGATATAATGAGAAAAGACGAAGGTGGCAAGGGCGGTGTCATAGTCAACATATCTTCA
ATAGCAGCGCTGCTTCAAGACGAATTCCTGCCTATATATTACGGAACTAAGAGTGCTGTT
CTGCAATTCAGCAACTGTATTGGGTTACCTCGATATTTCTCCAGAACTGGCGTCCGTGTT
ATAACAATGTGTTTCGGGGCCACAAACACCGCCCTCCTGCACAAGGACATGATGGGAAAC
TTTGATAAAGTCATCGAAAACGAGATGATGGACATATTATCAAAGCACCCGATGCAAAAG
TAA
Protein sequence:
MDIMRKDEGGKGGVIVNISSIAALLQDEFLPIYYGTKSAVLQFSNCIGLPRYFSRTGVRV
ITMCFGATNTALLHKDMMGNFDKVIENEMMDILSKHPMQK