DPGLEAN20021 in OGS1.0

New model in OGS2.0DPOGS200146 
Genomic Positionscaffold2269:+ 65-776
See gene structure
CDS Length303
Paired RNAseq reads  56
Single RNAseq reads  342
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA002939 (6e-30)
Best Drosophila hit  photoreceptor dehydrogenase, isoform B (4e-13)
Best Human hit15-hydroxyprostaglandin dehydrogenase [NAD+] isoform 1 (2e-08)
Best NR hit (blastp)  putative alcohol dehydrogenase [Bombyx mori] (4e-17)
Best NR hit (blastx)  putative alcohol dehydrogenase [Bombyx mori] (3e-16)
GeneOntology terms





  
GO:0004022 alcohol dehydrogenase (NAD) activity
GO:0055114 oxidation reduction
GO:0005488 binding
GO:0006911 phagocytosis, engulfment
GO:0042574 retinal metabolic process
GO:0004745 retinol dehydrogenase activity
GO:0042572 retinol metabolic process
InterPro families
  
IPR016040 NAD(P)-binding domain
IPR002424 Alcohol dehydrogenase, insect family
Orthology groupND

Nucleotide sequence:

ATGGATATAATGAGAAAAGACGAAGGTGGCAAGGGCGGTGTCATAGTCAACATATCTTCA
ATAGCAGCGCTGCTTCAAGACGAATTCCTGCCTATATATTACGGAACTAAGAGTGCTGTT
CTGCAATTCAGCAACTGTATTGGGTTACCTCGATATTTCTCCAGAACTGGCGTCCGTGTT
ATAACAATGTGTTTCGGGGCCACAAACACCGCCCTCCTGCACAAGGACATGATGGGAAAC
TTTGATAAAGTCATCGAAAACGAGATGATGGACATATTATCAAAGCACCCGATGCAAAAG
TAA

Protein sequence:

MDIMRKDEGGKGGVIVNISSIAALLQDEFLPIYYGTKSAVLQFSNCIGLPRYFSRTGVRV
ITMCFGATNTALLHKDMMGNFDKVIENEMMDILSKHPMQK