New model in OGS2.0 | DPOGS202424  |
---|---|
Genomic Position | scaffold3587:+ 1323-7048 |
See gene structure | |
CDS Length | 1152 |
Paired RNAseq reads   | 458 |
Single RNAseq reads   | 1306 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013290 (1e-118) |
Best Drosophila hit   | roughest (1e-24) |
Best Human hit | kin of IRRE-like protein 1 precursor (7e-10) |
Best NR hit (blastp)   | PREDICTED: similar to nephrin [Tribolium castaneum] (1e-49) |
Best NR hit (blastx)   | PREDICTED: similar to nephrin [Tribolium castaneum] (5e-52) |
GeneOntology terms    | GO:0005886 plasma membrane GO:0016202 regulation of striated muscle tissue development GO:0046667 compound eye retinal cell programmed cell death GO:0007156 homophilic cell adhesion GO:0007520 myoblast fusion GO:0016021 integral to membrane GO:0046666 retinal cell programmed cell death GO:0007409 axonogenesis GO:0048749 compound eye development GO:0001745 compound eye morphogenesis GO:0045177 apical part of cell |
InterPro families    | IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR013783 Immunoglobulin-like fold IPR007110 Immunoglobulin-like IPR013098 Immunoglobulin I-set |
Orthology group | MCL40828 |
Nucleotide sequence:
GGTCCACCAAAAATATTATCAAACAGAACACAGTCAGGTATCGAAGGGGAAACCGTGCGA
GTGGAATGTTCCTCCCTTTGTGTCCCGAAACCCGACGACATTAGATGGTATTTCGAAGGA
AGGGAAATTAGCGCCATTCTTGACCCGGATTACGCGACGTTACTGGAGACGTTACCTGAT
GGTATTACTAAGTCTAGTTTAGTGATACGTTCCAGCCAGTCAAAACATTATGGCGTGTAC
AACTGTAGCGTTACTAACGAATACGGAAACGCTAATGCTGCTATCAGCTTAAAGCCTTTA
AAAACCCTGCCGCTAGTTATAATACTCATAGGATCGACGTCTGGTATAATAGTTTTCTCT
GCTTTCGTCATACTTCTTGTTCTCTGTCATCGACGTAGAAGGAAGGGCGGTCGGATCAAC
GAGAAGCCAGACGTTACCGTGACTACTAGCGACATGTATAAAGAAAGTGACAGGAGCTCA
AACATCAGCGACCTCAAATTGCAGCTGCCTCAGAGCGATGGCAGCTATGATTTGGAATAC
ACTAGTTCAGATAGATCCGACGCAAAGCCTCAAGCAGGTTTACCACTCGCGGGTCCGGTC
TTACCAAACATACACTCTGATAGTATGTTACAGTTCAGATACAGCAATGACTATTCTGAC
CCAGCATACAATGACCCCTACTTTAAGAATCCGAACGCGTATGTTTACGACTACCCTCAA
GGTTATCCTCCGCCTGCACATTTGAGGGTACAGTCACCAACCTTAGAAGTTCCTTCTTCA
AGATCGCTTCAAGGGTCACTAACCCGGAGTATAGACACATCTTCAACTCTACCATTGTCA
GCTGGCAATGGTTCCCAAAATAATTCGCTACAACGAACGAAACACGACGAAACTGATGCA
ATTAATAACTTGGGTTTACCTGTCGGCGGGGAAGGTCCTCAAGTACCAGTTTACGCACAA
ACTGGTCCGAAAAATAATCCTAGCGTTGATGTGCGCTACGCCGCTACATATGGCAATCCT
TACCTCAGAAATAGTTCTGTGGGTTACCAAACAGTGCACACGGCGAGGCCGGCGGCCACT
CCCGCCCCACCGCCTTACTCACGTAACCAGCCAGGTAAAGGCAACGAGATTACCCACGCG
ACGCACGTGTAA
Protein sequence:
GPPKILSNRTQSGIEGETVRVECSSLCVPKPDDIRWYFEGREISAILDPDYATLLETLPD
GITKSSLVIRSSQSKHYGVYNCSVTNEYGNANAAISLKPLKTLPLVIILIGSTSGIIVFS
AFVILLVLCHRRRRKGGRINEKPDVTVTTSDMYKESDRSSNISDLKLQLPQSDGSYDLEY
TSSDRSDAKPQAGLPLAGPVLPNIHSDSMLQFRYSNDYSDPAYNDPYFKNPNAYVYDYPQ
GYPPPAHLRVQSPTLEVPSSRSLQGSLTRSIDTSSTLPLSAGNGSQNNSLQRTKHDETDA
INNLGLPVGGEGPQVPVYAQTGPKNNPSVDVRYAATYGNPYLRNSSVGYQTVHTARPAAT
PAPPPYSRNQPGKGNEITHATHV