| New model in OGS2.0 | DPOGS208197 |
|---|---|
| Genomic Position | scaffold158:- 184036-186170 |
| See gene structure | |
| CDS Length | 567 |
| Paired RNAseq reads | 1754 |
| Single RNAseq reads | 18287 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002309 (4e-68) |
| Best Drosophila hit | nucleoplasmin (3e-24) |
| Best Human hit | nucleophosmin isoform 1 (2e-06) |
| Best NR hit (blastp) | nucleoplasmin isoform 2 [Bombyx mori] (1e-71) |
| Best NR hit (blastx) | nucleoplasmin isoform 2 [Bombyx mori] (3e-66) |
| GeneOntology terms | GO:0042393 histone binding GO:0005730 nucleolus GO:0005634 nucleus GO:0042623 ATPase activity, coupled GO:0016584 nucleosome positioning GO:0003676 nucleic acid binding |
| InterPro families | IPR004301 Nucleoplasmin |
| Orthology group | MCL16298 |
Nucleotide sequence:
ATGTCGGACGAATATTTCTACGGTGTCACTCTCTCGTCATCACATCAGTCCGAGACATGG
GACCCCGAAGCAAAGGCGGAATACCCGCGAAGCAACAAATTACTCATCCGCCAAGCACTC
CTAGGTCCGGACGCGAAACCTGACGAACTTAACGTCGTTCAGGTAGAGACGATGTGTCTC
CAAGAATCTATAAAAATCCCAGTTGCCATCTTAAAAGTTGGTGAAACAAGACAAGCACGT
CTGGATATTGAGTTCCCAGATGCACCGGTCACCTTCACCCTTATACAGGGCTCGGGGCCG
GTTCACTTAATTGGGCAACACTTGTTGGGTGCCCTCGTGGAAGAGTTTGAGGATATGGAG
GAAATGGAAGAGGAGATGTTAGACGAAGAGGAAGGTGAAGACTCTCAGTTCAAGGAAGAT
GACAATAAAAGGAAAGCGTCATCTGGCAAACGCAAGGGAAATGAGGACGAGGACGAGGAC
GAGGCGGAACCAAAGGGCAAGAAGGCGAAAATGTCGAACAACGCTAAAGGCAAGGCTCCT
TCCCCCAAGAAGAACGCCAAGAAGTGA
Protein sequence:
MSDEYFYGVTLSSSHQSETWDPEAKAEYPRSNKLLIRQALLGPDAKPDELNVVQVETMCL
QESIKIPVAILKVGETRQARLDIEFPDAPVTFTLIQGSGPVHLIGQHLLGALVEEFEDME
EMEEEMLDEEEGEDSQFKEDDNKRKASSGKRKGNEDEDEDEAEPKGKKAKMSNNAKGKAP
SPKKNAKK