| New model in OGS2.0 | DPOGS208201 |
|---|---|
| Genomic Position | scaffold158:- 149686-158135 |
| See gene structure | |
| CDS Length | 2694 |
| Paired RNAseq reads | 1167 |
| Single RNAseq reads | 2639 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002311 (0.0) |
| Best Drosophila hit | CG31028, isoform C (0.0) |
| Best Human hit | ND |
| Best NR hit (blastp) | GJ10373 [Drosophila virilis] (0.0) |
| Best NR hit (blastx) | GJ10373 [Drosophila virilis] (0.0) |
| GeneOntology terms | GO:0055114 oxidation reduction GO:0046872 metal ion binding GO:0006801 superoxide metabolic process |
| InterPro families | IPR001424 Superoxide dismutase, copper/zinc binding |
| Orthology group | MCL16439 |
Nucleotide sequence:
ATGAGCGTCGGTGACCTGGACAGCAGGCTGGGACTCATCAAAGTGGCCACAGACCCGAAT
GTAAAGAACACGAGGACTCTGTATAGAGACGACGTGTTGAATGTTCTGAGAAATGATATG
GAGGTCACGAGGAGAAGTCTGTACGTGGTCATCTATGATAACAAACACTCGGAGAGCTTC
CTAGCATGCGCCAAGTTAAGGACCATGCCTCCGCGGAGTACGAAGGGCCTTATCAATATG
GATGGTATACGGGGCACCGTTGAGTTCACACAGCGCTCTCCCTTCGACCCGACCTGGGCT
AACTTTCAATTGGGTGCGTCCGATCAGGACTACGAGTCCAACCTGCGGTTCGTGAGCTCC
ATGGTCCAGTACAGCATCAGGGAGCTTCCTCCAAAGCTGGTGGACGCCAGTCAGTGGACC
AGCGTGTGCAATACTACAGGGAATTTATACAATCCCATGGGACTGGACTTGAACTACATA
CCGCCACCAGGTATGGGTACCCAGGATCAGTATCCTGTAGGTGATCTCCTCGGAAAGTAC
AAGGATCGCACCGAATACCTGAATCACAAGTACCTCCTGCCGGGACTCGCCAATGAACTA
AGTGGAGCCTACTGGGACGCCTGGCTACCGCTCAGCGGCAAACATAGTGTGGCGCATCGA
GCTGTTGTACTCACGCGTCGTCCTCCCAAGCACGAGGTGTGCGGCACGATCTTGCTGTAC
GAGTACGGCACGGACGAGCAGACGAGGATGACTTCCGCCAGGGTAGTGTTCAGATACCCC
ATAGTGGGCAGTGTGCTGTTCAGACAACCCAGCGAGAGGCCCTGGGAAGATACCACCATT
ATTATAGAGAGTATGGTCCACGCAGATGGTGCCAATATAAACAACACATTCGAGCATCGC
TGGGCACTCCACTCGGAGCCCCCCGGGAAGGATTACTACAACTGGACGGGGCGCTGTCTG
TCGGCGGGGAGCCTGTTCGATCCTTACGGGATCGACGTGGACAGTAGACATCCCGAGTAC
TACTGTAGGAGGGGTCTCGAGGGACTCTGCCGTCTAGGAGACCTCACCACCAGACACGGC
ACGCTGTCAGTGGCCGGCAAGAAATCGGCGTCTTCTGCCCTGACGAGGCGGCTGTTCTCT
GACCCGCTGCTGTCTCTCCACGGGAGGAGGTCGGTTCTGAGGCGGTCGCTGGTGGTGTAC
GATGACCACGGACCGCTCGCTCGGGGGGAGAGGATGGCCTGCTCGATTGTGACCGGACAC
GCTCGGCGGAAGGCGGTAGTCCAGGACTGGTTCGGGAACGGGAACGAGATTCGTCTCCGG
GGGAAGCTGGAGTTCACCCAGCAGTCGGAGTACGATGTGGTCAACGTGGAGGTCACGCTC
GAGGAGCTGGCGGCCGACGCCGGGGGATATAATATACATGTCACTCCCATCGAGAGAGAC
CTGGAGTTCCCATGCGAGAGGACGACCATCTACGACACCTACAACCCTTTCCACGTCAAC
AAGGCTCAAGTGCCGCCGCCGACCAAAGGCACAGCGGACCAATACATGTTGGGTGACCTG
GGCGGCAAGTACGGTCTGTTGAATGATCTCAAGAAATACAGCACCTACTACAACGAGACT
CAACTCTCCCTGTTCGGACCGTACAGTATCCTCGGACGGTCGGTCGCTCTGCATAAAAAG
TCGTCCGACCGTCGCTGGGCGTGTTCGTCCGTGGAGCGCGGGTACAGTCCATCCGAGGCC
CGGGAGCTGCGCGCCGTGGCCTCCTTCCACCACCCCGGGGGGTTCGCGTACGGCTACGTG
AGGTTCACACAGCTGATACACAACGATGGCAGCGCCAGCGACACCCTCATAGAAGTCAAC
CTGAGACATCCGGGGGTCAGGGACCGGAACCTGACTCACGATCACCGCTGGGAGGTGTTC
GTGAACCCGGTGGGTGTGGACGCGGCGGTGAAGGTGACGGGCACGCGCTGTGTGGCGGGC
GGATACCGCTGGAACCCATACTTCACGCAGCTCGCCGACCCTCTTAATCACGAGCTGTAC
AGTCAAGAGTGTGGCGCGGACAACCCGCTGCGGTGTGACGTGGGCGACCTCACCTCCAGG
CTGGGAACTATATCGGTGGGCGGTGACCGTCAGGTGTTCGTGGACAGTAACCTGCCGCTG
GAGGGGTCGGTGTCGGCGCTGGGTCGCTCGCTGGTCATCCTGGGCCCCGAGCGCTCCTCC
GAGAGGTTCGCGTGCGCCAACATACAACCAGACAAGGACATCATCAAATATGTCAACGTT
ATGAAGCCGCCCAGATTCGTCCTAGGTCAGTTCCTGTCCGAGGTCCGCAAGGTACTAGGC
GCTCCGCCGTGGATGGTGTCTGTGGACTCCCGGCGCACGCGGCCTCTCCACCGCGGCTCC
TGTCTCCAACTCCTCATGCACTTCACGGGACCCGACGCTAACAGACTCGAGCTGGACTTC
ACGAGGTTGCTGGCGTCGGGTCGCCTGGCCGCGCCCAGCATCTTCATCCCGGGGTACGTC
AACACCAAGAGGAAGACCACCATATCGTATAAGCAGTGTGGAGTCACTGACCCCAACGAA
AAGAAGAAGACTTCATTTTTCTTCCCGGGTCGGTCATCCTCGTCGTGGTCGTGTCGGGTC
GGTGTCGTGACGTTCCTCTCCTGTATCATATTGTCGATGCTTCAGTTACCATAG
Protein sequence:
MSVGDLDSRLGLIKVATDPNVKNTRTLYRDDVLNVLRNDMEVTRRSLYVVIYDNKHSESF
LACAKLRTMPPRSTKGLINMDGIRGTVEFTQRSPFDPTWANFQLGASDQDYESNLRFVSS
MVQYSIRELPPKLVDASQWTSVCNTTGNLYNPMGLDLNYIPPPGMGTQDQYPVGDLLGKY
KDRTEYLNHKYLLPGLANELSGAYWDAWLPLSGKHSVAHRAVVLTRRPPKHEVCGTILLY
EYGTDEQTRMTSARVVFRYPIVGSVLFRQPSERPWEDTTIIIESMVHADGANINNTFEHR
WALHSEPPGKDYYNWTGRCLSAGSLFDPYGIDVDSRHPEYYCRRGLEGLCRLGDLTTRHG
TLSVAGKKSASSALTRRLFSDPLLSLHGRRSVLRRSLVVYDDHGPLARGERMACSIVTGH
ARRKAVVQDWFGNGNEIRLRGKLEFTQQSEYDVVNVEVTLEELAADAGGYNIHVTPIERD
LEFPCERTTIYDTYNPFHVNKAQVPPPTKGTADQYMLGDLGGKYGLLNDLKKYSTYYNET
QLSLFGPYSILGRSVALHKKSSDRRWACSSVERGYSPSEARELRAVASFHHPGGFAYGYV
RFTQLIHNDGSASDTLIEVNLRHPGVRDRNLTHDHRWEVFVNPVGVDAAVKVTGTRCVAG
GYRWNPYFTQLADPLNHELYSQECGADNPLRCDVGDLTSRLGTISVGGDRQVFVDSNLPL
EGSVSALGRSLVILGPERSSERFACANIQPDKDIIKYVNVMKPPRFVLGQFLSEVRKVLG
APPWMVSVDSRRTRPLHRGSCLQLLMHFTGPDANRLELDFTRLLASGRLAAPSIFIPGYV
NTKRKTTISYKQCGVTDPNEKKKTSFFFPGRSSSSWSCRVGVVTFLSCIILSMLQLP