| New model in OGS2.0 | DPOGS208217 |
|---|---|
| Genomic Position | scaffold158:+ 205639-233806 |
| See gene structure | |
| CDS Length | 2418 |
| Paired RNAseq reads | 6753 |
| Single RNAseq reads | 16640 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002264 (2e-73) |
| Best Drosophila hit | CG31352, isoform C (0.0) |
| Best Human hit | actin-binding LIM protein 1 isoform c (1e-75) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC012552 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC012552 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0003779 actin binding GO:0008270 zinc ion binding |
| InterPro families | IPR001781 Zinc finger, LIM-type IPR003128 Villin headpiece |
| Orthology group | MCL10672 |
Nucleotide sequence:
ATGAGACCCAAGGATGGGTTGGACGCGAAGATCCAGACGGGGACCTTCATCCTGTCCGAG
AAAATAGACGACACTAAAACGAAGAAGAGCGAAAAGGAACTCAAGAAAGAAATGAAGAAG
CTGGAGAAAGAAAAACTAGAACAAGAGAAGAAGGAGAAGAAGGCGAGGGAAAAAGAAAAG
GAGCGTGAGAGGCAAGCGAAGAGAGGTAAGGTCGTGTGCGGCGCGTGCGGCGGCAAGTGT
AGCGGGGAGGTGCTCCGGGTCACCGACAAGTACTTCCACATGGCCTGCTTCACGTGTAGA
ACCTGCTCCGCCTCGCTCGCTCGGGGTGGGTTCTTCTGCAAGGACGGACATTACTACTGC
CCCCAGGACTACCAGCGAGCCTTCGGCACGAGATGCGCCGCCTGCAACCAGTACGTGGAG
GGCGAGGTGGTCTCCGCTCTCGGGAACACATACCATCAGAAGTGTTTCACTTGCGCCAGA
TGCAAACGAGCATTCCCGTCCGGCGAGAAGGTGACGTACACGGGCAGTGAGGTGGTCTGC
GCGTCCTGCTCCGCAGGCCCACAGAAGGCGACGGCACGCGCAGCTCGCTCCCCACCCTCC
CCGGCCTCCCCAGCCTCCCCGGCCTCTCCCGTCACCCCGTCTTCGCCGGTCAACAACCAC
GTTAGGGGCAGAGAACCAGACCCCAATGAATGCGCGGGATGTGGCCAGGAGCTAAGCGAG
GGTCAAGCGCTGGCCGCTTTGGACCGTCAATGGCACCCGGCGTGTTTCGCGTGCGGGGAG
TGTGGCGCCGCCCTGCCCGGGGAGTACATGGGCAGAGACGGCGTGCCCTACTGCGAGAGG
GACTACCAGCGCCTGTACGGAGTCAGGTGCGCCTACTGCAGACGGTACATCGCGGGGAAG
GTGCTACAGGCCGGCGAAAACCATCACTTCCACCCCACCTGCGCACGCTGCACCAAGTGC
GGAGACCCCTTTGGCGATGGCGAGGAGATGTTTCTGCAGGGCGCCGCCATCTGGCACCCG
CGCTGTGGACCCGCGCCGCACCAGCCGCACCAGCCCCTCACGCCCGCCGAGCTGGAGCGG
GCCTCCTCTGAGCTGCAGTTCAGTCTCCGCTCGCGCACTCCCAGCGTCAACGGCTCCTAC
TGCAGTCCCTACAGTAGCTTGACCAGAAAGTACGGCTACCGCGCGGTATCCCCGGGTCTG
ACCTTGCGCGAGTACCGCTCCTCCGAGGGCTCCCCTCACCGCATCACCACCTACTCGTAC
CTGGCGTCCGAGCCGTCCACCCTCCGCCGCTGCGTGCAACCCTCGGACCGCCCCCCGGCG
TCTCCTCACTTCCACCGCCCGCCCTCAGCAGGCGGCACGCGGTCGTCGTCGCGGGCGGCC
TCCAAGGCTTCATCCCGCCCCGGGATGCGCGCGCTCGTGGACTCCATCCGCAGCGAGACT
CCTCGCCCTCGCTCGCCTCATCTCAACAACGACGAGCCCATCGAGCTGGCATCCTACCCT
GCGGCTTACAAGCCGCCGCCCGGCACCTTGCCCAAAATAGAGCGGGATGACTTCCCCGCG
CCGCCCTACCCGTATACCGATCCGGAGCGCCGTCGCCGCTGGTCAGACACGTACAAGGGC
GTCCCGGACAGTGACGACGAGACGGACCGCGTCAACGGCCACGACGACCGCCTCAGGAAG
GAGGAACAGGAACTGGCCAAGATCGACACCGGGATAGCACAGGTGTTCCTGAAGGAGGTG
AAGGAACGAGAGAAACTGCAGCAGTGGAAGAAACAGAATCTGGACCCGAGAAACGCCAGC
AGGACGCCCAGCGCCGCGCGCGAGGCCGGAGCTCGTCTGCGGTACTCTTCCCCGCTGGGA
GCGTCGCCCTCACGCTCCCTGGACCGCTCCCGACACGAGCCCGACCCGCCGCATGCTCTG
CCATCCTACAACGCGCTGCTGGTGGGAGGCGCCCGCTCCGCCACGCTGCCCGCCGCCCTG
CCGCACTGTAACGGTGACTTCACATTCAGCGGACTCGGAGACAAGACTCACAGCACGGAC
TTCAGTAGCGGCAAGTCAGACATTTCGGCCGGATCGATCACCGACGTCGATAGGAGTGCT
TGTGTCGCGTCCCGGGCGGCGTGGCTCGTGCGGGCGGACCCGGGCGGCGTGGCGCGTGCG
GGCGGCGTTCCGGGCGTGCGCCGCTCGCTCCCCAACATGGCGACCTCTCACCTGCTGCAC
GAGCCGGCCAAGCTGTACCCCTACCACCTGCTGCTCATCACTAACTACCGCCTGCCGCCC
GACGTCGACCGCCTCAACCTGGAGCGCCACCTGTCGGACGCGGAGTTCGAGGCCATCCTG
CAGGCGCCGCGGCCGGAGTTTTACCGCCTACCGCAGTGGCGCCGCAACGAGCTCAAGAGA
CGGGCGAGGCTGTTCTGA
Protein sequence:
MRPKDGLDAKIQTGTFILSEKIDDTKTKKSEKELKKEMKKLEKEKLEQEKKEKKAREKEK
ERERQAKRGKVVCGACGGKCSGEVLRVTDKYFHMACFTCRTCSASLARGGFFCKDGHYYC
PQDYQRAFGTRCAACNQYVEGEVVSALGNTYHQKCFTCARCKRAFPSGEKVTYTGSEVVC
ASCSAGPQKATARAARSPPSPASPASPASPVTPSSPVNNHVRGREPDPNECAGCGQELSE
GQALAALDRQWHPACFACGECGAALPGEYMGRDGVPYCERDYQRLYGVRCAYCRRYIAGK
VLQAGENHHFHPTCARCTKCGDPFGDGEEMFLQGAAIWHPRCGPAPHQPHQPLTPAELER
ASSELQFSLRSRTPSVNGSYCSPYSSLTRKYGYRAVSPGLTLREYRSSEGSPHRITTYSY
LASEPSTLRRCVQPSDRPPASPHFHRPPSAGGTRSSSRAASKASSRPGMRALVDSIRSET
PRPRSPHLNNDEPIELASYPAAYKPPPGTLPKIERDDFPAPPYPYTDPERRRRWSDTYKG
VPDSDDETDRVNGHDDRLRKEEQELAKIDTGIAQVFLKEVKEREKLQQWKKQNLDPRNAS
RTPSAAREAGARLRYSSPLGASPSRSLDRSRHEPDPPHALPSYNALLVGGARSATLPAAL
PHCNGDFTFSGLGDKTHSTDFSSGKSDISAGSITDVDRSACVASRAAWLVRADPGGVARA
GGVPGVRRSLPNMATSHLLHEPAKLYPYHLLLITNYRLPPDVDRLNLERHLSDAEFEAIL
QAPRPEFYRLPQWRRNELKRRARLF