| New model in OGS2.0 | DPOGS202562 |
|---|---|
| Genomic Position | scaffold523:- 21022-22551 |
| See gene structure | |
| CDS Length | 1044 |
| Paired RNAseq reads | 240 |
| Single RNAseq reads | 485 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004339 (1e-139) |
| Best Drosophila hit | CG11788 (1e-62) |
| Best Human hit | sister chromatid cohesion protein DCC1 (2e-59) |
| Best NR hit (blastp) | PREDICTED: similar to CG11788 CG11788-PA [Tribolium castaneum] (5e-93) |
| Best NR hit (blastx) | PREDICTED: similar to CG11788 CG11788-PA [Tribolium castaneum] (2e-91) |
| GeneOntology terms | GO:0000775 chromosome, centromeric region GO:0000785 chromatin GO:0005515 protein binding GO:0005654 nucleoplasm GO:0034088 maintenance of mitotic sister chromatid cohesion |
| InterPro families | IPR019128 Sister chromatid cohesion protein DCC1 |
| Orthology group | MCL13398 |
Nucleotide sequence:
ATGCTTCTAGATGATAATTTACTCCAAGAAATAGAAGCTGGAAACCAGTTAATATTTAAA
GGTGATGTTGATGAAAATGCTGTTTTGTGTACACAAAGCCGAACTTACGATATTAAGGAA
GCTGAAACATCTAACTCCCTCCATCTCGTTCCTGACCTGCTGTTTGCGGCTTCAACCGAC
GACGGGAGGCCTCCAAGGAGTATCGTGCACAAGGATATACTGAATACATTTTTTACGTAT
TACGAAGTAAAGCCGTGCAAGCCGCGGCTGCTTAAGCTACAGAAACTACTAGAGGAAACT
TCATATCGCGGCTTGGAACTAGAGTATGAGGTGGACAAAACCAAGTTACTGACCTATGAA
GGTATATTTGATGTCATCCAAGCTTCTCGAGCTGAGTTAGATGAGGAGTTGGTGAGGCTG
CAAGCTTTGAAAATAGGAGAGCACTATCGATTACTAGATTTCGATTACGAGTTTAGAATT
TTATCATACATGCTGGACCTGATAGAAGAGAATTCATGGCCATTAAATAAAATATCGAGA
GAGGTCACTTTAGATAGCTTGAAAGATTTAGTTCCTGCTTGTATTTTGGAAGCGATGTTT
GGATTTTATACGATGGAATCAGTAGAAGAAGGAGGGACGCAATACTATCAGTACAAAGAA
GACAAAGTTTGCCGGTTTCTGGCGCGAGTCCTTTTGAAAAGCGCGGGAAAGTTTAATTTA
GTTGAATTCATGCAAGCGTGGCGGGATTCCGTACCCGAAGGAATGATAACACATAAATCC
ATGCTGGCCGGGATAGCGATAACGGACGAATCCTCACAACCACCAGTTATATGGGGTTTC
TCTGCGAGTGATTTGCCCGAGGACTTGAATCAGCGCTTTAAGATTCTGTTCCAAGCGAAA
CCCAAATGGACCCTTTCCGAAATATCGCCGTATATTGAGTTATACGCCACTGAGAAATTA
AATGTAAACGCCCTATTAACCAAGTACGCACGCGCTTCAGCTCAAGATGGCGTCAGAGTT
TTTTCTGCTAAACATATGAAATAA
Protein sequence:
MLLDDNLLQEIEAGNQLIFKGDVDENAVLCTQSRTYDIKEAETSNSLHLVPDLLFAASTD
DGRPPRSIVHKDILNTFFTYYEVKPCKPRLLKLQKLLEETSYRGLELEYEVDKTKLLTYE
GIFDVIQASRAELDEELVRLQALKIGEHYRLLDFDYEFRILSYMLDLIEENSWPLNKISR
EVTLDSLKDLVPACILEAMFGFYTMESVEEGGTQYYQYKEDKVCRFLARVLLKSAGKFNL
VEFMQAWRDSVPEGMITHKSMLAGIAITDESSQPPVIWGFSASDLPEDLNQRFKILFQAK
PKWTLSEISPYIELYATEKLNVNALLTKYARASAQDGVRVFSAKHMK