| New model in OGS2.0 | DPOGS210398 |
|---|---|
| Genomic Position | scaffold1436:+ 21643-22755 |
| See gene structure | |
| CDS Length | 1113 |
| Paired RNAseq reads | 673 |
| Single RNAseq reads | 2212 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008284 (2e-146) |
| Best Drosophila hit | embryonic lethal abnormal vision, isoform A (2e-50) |
| Best Human hit | ELAV-like protein 3 isoform 1 (4e-51) |
| Best NR hit (blastp) | PREDICTED: similar to ELAV-like protein 1 (Hu-antigen R) (HuR) isoform 5 [Canis familiaris] (9e-60) |
| Best NR hit (blastx) | PREDICTED: similar to found in neurons CG4396-PA [Apis mellifera] (2e-57) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0017091 AU-rich element binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait IPR002343 Paraneoplastic encephalomyelitis antigen |
| Orthology group | MCL40253 |
Nucleotide sequence:
ATGGAGAATGGCGGCGGCGACGCTAATTCCAATGTGTCACCCACCAAACTTATGGTAAAC
TATATTCCAGAATTGATGACGCGAGATATGATGTATGCCCTCTTCTCCGCCATGGGTAAA
ATAGAAAGCTGTAAATTAATAGCAAATAGAGGATACGGATTCGTAGAATACGAGAAACAC
GAGGACGCCGAGAAGGCGCGAGCCGCATTCAACGGCCTGTTGATGCAGGGCAAGACATTA
AAGGTGTCCTTCGCGCTTCTGAACCCCGAGAACAAGGTCAGCCACAAACCGGACACAGAG
TCGAATCTTTATATAAGTAATCTACCTCCAGACATGACACTAGAGCGGTTAAACATGTTA
TTCGGTCAGTTCGGAAACATAACTAACAGTCGGGTGTCACAAGGTATCGGATTCGTGTGC
TACGAGACGCGGCAGCAGGCTGAGGACGCGATAACGCACATGAACGGTCAGTCACCGATT
CCTGGCGCGGGCGCCATCGTGGTGAAGTTCGCCAACAAACCCAGCGCCAACAAGAACGCC
CCGCGGCCCATTCAGAGGGTTGGCGTGAGCGCGGCGCCGCTGGCCTACAACGGTGCGGCG
GCCGTGTTCAACGGTTCCACGCCGGCCTTCAACGGCACCAACCTGAGCGCGTTCGGAGCG
CGGCCCGCCACCGCGTTCGCACCCGGCTTCCCGCAGGCGTCGCCGCCGCCTCTGCTGCCG
TCCCCGGGTAAGGCACTGCCCTTCATCAACAAGGGCCAGCAGCGCTTCAACCCCATGGCT
GCCACTAACCACAGTCCGTTACCGTTGTTAGGCGCCCCGGCCAGTCCGGTGCCGCTGCTG
GGCGCCCCGGCCGCCCCTCAGACCACGGTGTACGTTTACAACGTGGGCGAGGATACCGAG
GAACTGGCGCTCTGGCAACTGTTCGGTCCCTACGGTGCCATAGACTCCATTAAAGTGATC
AAGGACCCCGAGACGAAGAAAAATAAGGGGTTCGCGTTCGTTAACATGCGGGAGTACGAC
GAGGCCGCTATGGCCATCCAAGCTCTGAACGGATACACGCTCAACGGCCAGGTCCTCTCG
GTTAGCTTTAAGACTCAGAAGAGAAGTAATTAG
Protein sequence:
MENGGGDANSNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKH
EDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNML
FGQFGNITNSRVSQGIGFVCYETRQQAEDAITHMNGQSPIPGAGAIVVKFANKPSANKNA
PRPIQRVGVSAAPLAYNGAAAVFNGSTPAFNGTNLSAFGARPATAFAPGFPQASPPPLLP
SPGKALPFINKGQQRFNPMAATNHSPLPLLGAPASPVPLLGAPAAPQTTVYVYNVGEDTE
ELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQALNGYTLNGQVLS
VSFKTQKRSN