| Genomic Position | scaffold3139:- 2105-3820 |
|---|---|
| See gene structure | |
| CDS Length | 1716 |
| Paired RNAseq reads | 314 |
| Single RNAseq reads | 794 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002632 (4e-37) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (1e-171) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (1e-166) |
| GeneOntology terms | GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10254 |
Nucleotide sequence:
ATGTACAAGGCGACGAGGATCTTGACCGGAAAACGGGCCTTGAAGAAGAAGCCCCTGAAG
GACAAAAGGGGTGAACTGATTGCTACATCGGAGGGACAGCTCCAACGGTGGCGTGAACAT
TTTGAGGAAATTTTCCAAGTCTCAAATAGCCCCATAACACCAACCACAGCTGCCAACCTG
CCCGCTGTAAGCCTCGATATCGACGAGTCTCCCCCCACTGAAGAGGAAGTAGTGAAAGCC
ATCCAGTCGCTTAAGAACGGTAAAGCTCCTGGATACGACCTCATCACGGCGGAAATGCTA
AAAGCAGATATACCTACCGCTGCGAACGCGCTAACACCTCTTCTGCGGAACATTTGGTCA
GCCGAGGAGTTACCGGATGACTGGACTAAAGGGCTTCTCATCACCGTGCCTAAGAAGGGA
GATCTCAGTGAATGCGCCAACTGGAGAGGCATTACCTTGCTTTCTACTCCGTCTAAAGTG
CTGTGCAAGATTATCCTAGACAGACTATCGAGGGCCATTGAACCTCTCCTTCGCAGAGAA
CAGGCTGGATTCCGACCCAACAGATCGTGCACCGACCAGATTATTACCTTACGCATAATC
CTCGAACAAGCATCAGAATGGCAGAGGGAAATGTATTTGACCTTTGTGGATTTCGAAAAA
GCTTTCGACACGCTGAGATGGACAGGTATCTGGGAACGTTTACGTGAAGTTGGAGTCCCC
GACAAAATAATCAACCTGATAAAAGCCCTCTACAGGAAATATTCCTGTAAAGTAATTCAC
AACGGTCTTTTGTCGGAGGACATACCAGTCAATGCAGGTGTTCGCCAGGGGTGTCTCCTT
TCTCCTATTCTCTTCCTTGTCGTTCTGGATGGTATCATGCAGAAAGTGACGAAAAGCAAG
CGCCGCGGCATAGAATGGGGACTGTCCAGCACTTTGGAAGATTTGGACTATGCCGATGAC
CTATGCCTGCTGAGCCATACACACGCCAACATGCAAACCAAACTGGACGACCTACGACGA
GAAGCATTAGAGATGGGGCTAAAAATAAACACGCGAAAGACCCAGGAGATGAGGTGCGGA
GCAACAACCTCTCTGCCGTTGCTCATTGGCACAGAGGCTATAGAAAAAATCCACAAATAC
ACCTACCTAGGAAGCATAGTATCGGAGAGTGGAGGTGCCGAAGAGGACATCGCTTCGAGA
ATCGCCAAATCAAGAGCAGCCTTCGCGCAACTCCGTCCTGTATGGCAGTCGCGGAAACTA
ACCAGGAGAGTTAAACTCAAAATATTCCGGTCCAACGTCAAATCCGTGCTGTTATACGGA
TGTGAGACGTGGAAGGTTACTAAGGACATCTCGCATCGGCTTCAGGTCTTCGTCAATTGG
TGTCTTCGCCGTATTCTCGGTATTTACTGGCCCGAGAAAATTTCCAACGTTAATCTCTGG
GAACGCTGCGGTGAGACACCGATTGACCTGCAAATCAAACGTCGCAAGTGGAAGTGGATC
GGCCACGCGCTCCGAAGGGATCCGGAACACATACCGAGACAAGCCTTAGACTGGACCCCT
GAAGGAAAGCGGAAACGTGGTCGCCCTAAGCAGACCTGGCGGCGGACGATCATTGCAGAG
GTCAAAAACATCGGCAAGACTTGGAGCGACATAAAAGGCGAAGCTCAAGATCGAACGAGA
TGGCGACGTACTGTGGATGCCCTCTGCCCCATCTAG
Protein sequence:
MYKATRILTGKRALKKKPLKDKRGELIATSEGQLQRWREHFEEIFQVSNSPITPTTAANL
PAVSLDIDESPPTEEEVVKAIQSLKNGKAPGYDLITAEMLKADIPTAANALTPLLRNIWS
AEELPDDWTKGLLITVPKKGDLSECANWRGITLLSTPSKVLCKIILDRLSRAIEPLLRRE
QAGFRPNRSCTDQIITLRIILEQASEWQREMYLTFVDFEKAFDTLRWTGIWERLREVGVP
DKIINLIKALYRKYSCKVIHNGLLSEDIPVNAGVRQGCLLSPILFLVVLDGIMQKVTKSK
RRGIEWGLSSTLEDLDYADDLCLLSHTHANMQTKLDDLRREALEMGLKINTRKTQEMRCG
ATTSLPLLIGTEAIEKIHKYTYLGSIVSESGGAEEDIASRIAKSRAAFAQLRPVWQSRKL
TRRVKLKIFRSNVKSVLLYGCETWKVTKDISHRLQVFVNWCLRRILGIYWPEKISNVNLW
ERCGETPIDLQIKRRKWKWIGHALRRDPEHIPRQALDWTPEGKRKRGRPKQTWRRTIIAE
VKNIGKTWSDIKGEAQDRTRWRRTVDALCPI