| Genomic Position | scaffold5109:- 269-2752 |
|---|---|
| See gene structure | |
| CDS Length | 2484 |
| Paired RNAseq reads | 102 |
| Single RNAseq reads | 228 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001404 (3e-06) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | reverse transcriptase [Papilio xuthus] (0.0) |
| Best NR hit (blastx) | reverse transcriptase [Papilio xuthus] (0.0) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003964 RNA-directed DNA polymerase activity GO:0003723 RNA binding |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10007 |
Nucleotide sequence:
ATGGCGGTGGAGGCGTCGATCGTCCAAGCCTGGACCATGCGAGTTGAGCAGCCCGTTGAG
GTGGATGAGGAGGCGCGCAAGTTCCGCCGGAGTCTATGGCGGATTTGCGATGCGTCGATG
CCCCGTGTCGCGCAACGCCCTCCCAGACGCCAGGTGTATTGGTGGACGCCGGAGATCGCG
CAGCTGCGTGCAGTCTGCGTGGTGGCGAGGCGCCAGTACACCCGACAACGAAGGCAGCGT
CCTCGCAACGAGGCCGTCGAAAGTCGGCTTCGTGACGTCTACAACGAAGCGAAGAGCGAG
CTTCGGCAAGCTATCTGTAGGTCGAAGGATACGGCTCGTGAGGAGCTACTCGTGCGTCTA
GACAATGACCCGTGGGGGCGTCCGTATCTCGGTGCCCGGAATAAAACCCGGACCCAGACG
GCCCCGATCACGGAGAGTCTAGAGCCGGAGCTGCTGCGACGCGTCGTTTGTGCTCTCTTC
CCCGAGGAGGTCGCGCACTCGATGCCAACGGCAGGCACTTCTCGCGAGCTGGAACGGGCG
GTAACTATTGCGCCCGTTACTCTGGAGGAGCTCGAGAGGACTCTGTCACCGCTAAAGGCC
AAGAAAACCGCCCCCGGGCCGGACGGTGTCCCCGGACGCGTCCTGGCTCTCGCTCTGGGC
GAGTTGGCCGAGTGGTTCTTGGAGATCCTCAATGAGTGTTTGAGGACGGGCCGCTTTCCA
TCGGTTTGGAAAGAAGGACGGCTCGTTCTCCTCCAGAAGGTAGGTCGACCTGCAGACTCG
CCGTCTGCCTACCGTCCGATCGTGCTGCTAGACGACGCGGGTAAGCTCTTTGAGCGAATA
CTAGCCAACCGCGTCGTCGCTCACTTGCGCAGCGTAGGGCCCGATCTGGCCGAGTGCCAG
TATGGTTTTCGGGGTGAGCGTTCTACCATCGACGCCATCTCGAAGCTGAGGAGTCTTGCG
GATGATGCCGTGTCGAGGGGTGGGGTGCTGTTGGCGGTGTCCTTGGATATCTCCAACGCA
TTTAACACCCTTCCTTTCGGCGTCATTGAGGAGGCCCTCAGATACCATGGTCTGCCACTC
TACATCCGGCGGACCATCGGGTCTTATCTCCGCGGACGAGAGATCTCGTTCGTGGGGTGT
GACGGCCGGGTTCATCGCCATGAGGTGCGCTGCGGCGTTCCGCAGGGGTCGGTTCTTGGG
CCGCTCCTGTGGAACTTGGGCTACGACTTCGTGCTACGCGGTGCCCTCCTAACCGGGCTG
AGCGTCGTTTGCTACGCGGACGACACGCTCGTTGCAGCCCGAGGCGAGGACCTGGAAGAG
GCGACGGTGCTTGCTGAGGCGGGAGCCGCCTTGGTCGTGCGGCGCATCGAAATGCTCGGG
CTGAGGGTGGGCCTGGATAAAACAGAGGCCCTCCTGTTCCACAGCCCTCGAGCCAGACCG
CCGACGGGCGCCAGCATCAACATCTGCGGCGTCCGCGTCGAGCTCAGTTCCCGGATGAAA
TATCTGGGGCTGACTCTGGACGGAAGGTGGAGCTTCCGGGAGCACTTTCGCGGTCTAGTT
CCGAAACTCCTCGGGACGGCGAACGCGCTCGGAAAGCTTCTGCCAAATCTCGGTGGTCCC
AGCGCGACATGCCGGCGTCTGTACACCGGTGTGCTGCGCTCGATGGCGCTGTACGGAGCT
CCAGTGTGGGCCGGTGCCCTCACATCGCCGAACGTGACGGCGTTGCACAAAGTGCAGCGC
GTCATGGCGGTGAGGGTGGTACGGGGATACCGCACTGTCTCCCACGAGGCGGCTTGCGTG
CTGGCTGGGACGCCTCCTTGGGACTTGGAAGCTCAGGTCCTGGCGGAGGTTTACCAACAG
CGCGCACGAGCTCGTTCCCAGGGTGTGAATCCACCCCGGGAACAGGTGGAAAGTTGGCGT
CGCTCCGCGCAAGTGGCGCTCTTTCGTCGTTGGAAGCGACGGCTCTCTGTGCCAAAGGCC
GGGTTGCGCACCGTGGAGGCGGTTCGGCCGCTCCTCAGGGAGTGGGTGGATCGCCGACAT
GGTTCCTTAACCTTCCGGTTGGTGCAGATCCTTTCGGGACACGGCAGTTTCGGAAGGTAT
TTGTGCCACATAGCCGGGAGAGAGCCGACGTCGGCGTGTCATCACTGTACTTGTACGGAA
GACACTGCCGACCACACGCTGGCGGAGTGCCCTGCGTGGGAATCGGAGCGGCGCGAATTA
TCCACGGTGGTTGGCGCGAACCTCTCGTTGTCGGCCGTTGTTAAGGCAATGGTGGGTAGC
GGGAGGGCCTGGGCGGCGGTGGTCTCTTTCTGTGAGGTTGTCATCTCGCGGAAGGAGGCT
GCCGAAAGAGTGAGGGAAGACGATCCCTCCTCGATGCCGATGCGCCGACGGAGACCGGGT
CGTAGGCAGCGGGATATGCCCGCCGAATGCCTCCCCAATGAGAGGAGCCTGCGGGTGTCG
GAGGGGAAATCCGATGCCCGGTGA
Protein sequence:
MAVEASIVQAWTMRVEQPVEVDEEARKFRRSLWRICDASMPRVAQRPPRRQVYWWTPEIA
QLRAVCVVARRQYTRQRRQRPRNEAVESRLRDVYNEAKSELRQAICRSKDTAREELLVRL
DNDPWGRPYLGARNKTRTQTAPITESLEPELLRRVVCALFPEEVAHSMPTAGTSRELERA
VTIAPVTLEELERTLSPLKAKKTAPGPDGVPGRVLALALGELAEWFLEILNECLRTGRFP
SVWKEGRLVLLQKVGRPADSPSAYRPIVLLDDAGKLFERILANRVVAHLRSVGPDLAECQ
YGFRGERSTIDAISKLRSLADDAVSRGGVLLAVSLDISNAFNTLPFGVIEEALRYHGLPL
YIRRTIGSYLRGREISFVGCDGRVHRHEVRCGVPQGSVLGPLLWNLGYDFVLRGALLTGL
SVVCYADDTLVAARGEDLEEATVLAEAGAALVVRRIEMLGLRVGLDKTEALLFHSPRARP
PTGASINICGVRVELSSRMKYLGLTLDGRWSFREHFRGLVPKLLGTANALGKLLPNLGGP
SATCRRLYTGVLRSMALYGAPVWAGALTSPNVTALHKVQRVMAVRVVRGYRTVSHEAACV
LAGTPPWDLEAQVLAEVYQQRARARSQGVNPPREQVESWRRSAQVALFRRWKRRLSVPKA
GLRTVEAVRPLLREWVDRRHGSLTFRLVQILSGHGSFGRYLCHIAGREPTSACHHCTCTE
DTADHTLAECPAWESERRELSTVVGANLSLSAVVKAMVGSGRAWAAVVSFCEVVISRKEA
AERVREDDPSSMPMRRRRPGRRQRDMPAECLPNERSLRVSEGKSDAR