Genomic Position | scaffold4009:- 4356-6017 |
---|---|
See gene structure | |
CDS Length | 954 |
Paired RNAseq reads   | 330 |
Single RNAseq reads   | 1109 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004685 (3e-10) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (6e-102) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (1e-102) |
GeneOntology terms    | GO:0003964 RNA-directed DNA polymerase activity GO:0003723 RNA binding GO:0006278 RNA-dependent DNA replication |
InterPro families   | ND |
Orthology group | MCL10012 |
Nucleotide sequence:
ATGGCAGTCGCTCCGTTAAAATCACTCCTCGCCACTCATATGGTTGACAAAGTCAATGAC
TTGGTAAAGCAGGTAGCGGTAGTGCTATCTGAAGACCTTCGGAATGGTCTTCTTAAAGTA
GACCGTCGCTGCGACCGTCTGAAGCGGGTGCGAGTACTGATCAGGGAACTCATTACTAAC
TTAATCAGTCCTTATACTCCTCAGGCGGGATGTAGCGAGTCCGAAAAAGAGTCATTCTAT
AAGCAATTTGAAGAGGTTCTACGTGCTATACTAGCTGCTGAAGTAATCATAGTTGGGGGG
GGACTTAAATGGCCACCTCGGGATAAGGCGACGCAAGATATCGCAAAATGTCTTAGCGTC
AAAGATTCCCAAGGCACGTTGCTGTGTAATCATGCCTCTGTGAAGGAGAGATGGAGATGC
TACTTCAAGGAGTTGCTAAATACTCAGCACCCGTGCAGTCTTCCAACCGAAATACCTCCT
AATCTTGGACTTATTGCCCCGATAACACCTGACGAAACTCGGAATTGTCTTCGACGCATG
AAGAATCGGAAAGCGGTGGGACCTGACGATATTCCGATCGAAGCGTGGAAATCATTGGGC
TCTCTTGGTGTGCTCATACTGACGGACCTTTTTAACCGCGTCTTGAACACTGGGACTATG
CCACATCAGTGGCGTTATAGTTACATTACCCCTATATACAAAGGCAGGGGCAGTGTTCAA
GATTGTGGTAGTTATAGGGGCGTTAAGATCATGAGTCACACCATGAAGCTCTTTGAGCGT
ATGATCGACCTCAGGCTCCGCCGAGAGTGTACTGTCTCGGAATGTCAATATGGATTTCAG
CCAGGATCGGGCACCTTGGACGCCATCTTTGCCATCAGAACTCTGATGGAGGCATACAGG
GAAAAAAAGGAGAGCTCTGCATGTCGCATTCCTAGATCTGCAGAAGGCCTTTGA
Protein sequence:
MAVAPLKSLLATHMVDKVNDLVKQVAVVLSEDLRNGLLKVDRRCDRLKRVRVLIRELITN
LISPYTPQAGCSESEKESFYKQFEEVLRAILAAEVIIVGGGLKWPPRDKATQDIAKCLSV
KDSQGTLLCNHASVKERWRCYFKELLNTQHPCSLPTEIPPNLGLIAPITPDETRNCLRRM
KNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQ
DCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYR
EKKESSACRIPRSAEGL