New model in OGS2.0 | DPOGS211149  |
---|---|
Genomic Position | scaffold540:- 44846-46715 |
See gene structure | |
CDS Length | 1692 |
Paired RNAseq reads   | 326 |
Single RNAseq reads   | 825 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003022 (5e-157) |
Best Drosophila hit   | CG6758 (8e-58) |
Best Human hit | F-box only protein 42 (5e-62) |
Best NR hit (blastp)   | PREDICTED: similar to f-box protein [Nasonia vitripennis] (2e-92) |
Best NR hit (blastx)   | PREDICTED: similar to f-box protein [Nasonia vitripennis] (3e-85) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families    | IPR015915 Kelch-type beta propeller IPR006652 Kelch repeat type 1 |
Orthology group | MCL12941 |
Nucleotide sequence:
ATGAGCGTTTGTAAAAGGTGGTGTAACTGCGCAGAGAGTGTACTGCATAAAACATCCATT
AAATTGGTAAAAGCTATTGGAGAATTTAATATTTTGTGGAAAAACGTTGTTTCGAGTGAT
ATTGTACCAAGTATTACTAAGAGATTCTCTCATGCAGCATGCATCCTTGAGAACAATATG
TATATATTTGGTGGATGCACAACAAATGCTACATCATTTAATGATTTATGGAAATTTGAC
TTGTCCAAAAGGCAATGGGTCAGGCCTCTAGCCACTGGTACATATCCAGTACCTAAAGCC
TATACAACTATGGTCGATTATAAAGATTGCTTAATAGTTTTTGGAGGATGGACTTATCCT
TCTCTTTCTCAATATTACCAGAATGTTACAATGTTTAATGATATCCATTTTTACTGTGTG
AATACTAATAAATGGATTTTAATTAATACAAATAACCCACCCCCTCCAGTTGCTGGGCAT
TCTGCATGTATCCATGATGATGAAATGGTAGTTTTTGGTGGCCTAGTTATGTCGGCAACA
CAGAATTTTCAGATACAGTGTTCAAATGATGTATGGGTTTTAGATTTATCAAGTTTCAGT
TGGAGAAAACAGCCCACTACTAGGCCCAGACCATCCCCACGGTATGCCCAGTCGCTTATT
CAGTTAGATTCTGATCAATTATTACTATTAGGTGGTGTGCAAACTTTGCAGAATAGATTT
GTATATAGTGATTGTTGGGTACTGACTATGAAAGGACCAATCTGGACCTGGAAAGAAATA
GCAGTTAGAAATAAAGAGTGGGCATCAGCAAATATATGGTGTAATCCTGCTTGTAAAGTA
GGAGACAAAGTTGTCAGTTTGAGTAGGAGCAGAAATGGCTGGAATAGCGCAAAACCATTA
GTTACGTCAGCTGTTCGATTATCTAACTTTGGTAGAGCAGAAGGAGCTCCAGTTTCAGTG
AGAGTAGAGCAAAGTTTGCAGAGACCATTAGATAGAGACCAAAATATAAATGGAAGGCGT
GGTATATTACCACGACAAAGAGTTCCTGTAAATGAACCAATTGCTGGGCCCAGTAATGAA
AATGATCAAGCGAGGATACCAAGAGCTGTTAATGAACATTTAAATCATGATTACAATATG
GCAGCATGTAGTGGAGAAGCTAGACAATTAAATAATGGTCTAGACATATGTAAAAAAGAA
ACGGCTTACAGAAGAAATAAAAATAAGAATAAAGGTATGAAGATTGTTAGACAACTTCAG
GAAGCTAATAAATATAGGATGGCAGCATTTGCCTGTGACTCTATAGGTAATGCTCCGCCA
GAAAATGATCTCATTAACCAAAGGCAAATTGCTCATTTAGAAAATAGATTAGATGCTCCA
GCAGATAACCAGGAACAGAGACAATCTAATGTCAAGAAAATTAAAAGGAATACACTGTCA
ATGCACGTCCTAGATATATCAACAATTGTGGGTGGTAACTCAATGAACTATGTGTCATGG
TTGTGCCCACGTCTCGGTGAAATGAGGGGTGCTCCGGAAGAATTGGTCATGTACTCCCTA
GTAAAGGGCAATGGCGAACTCATAATGTTTGGAGGTGTACACAATGATATTAGTATTTTG
AATTACAATGAGCAGCAAAATATGTACTCTAATTCTTTACATTTCATCACACCACCCAGG
GACATTATTTAA
Protein sequence:
MSVCKRWCNCAESVLHKTSIKLVKAIGEFNILWKNVVSSDIVPSITKRFSHAACILENNM
YIFGGCTTNATSFNDLWKFDLSKRQWVRPLATGTYPVPKAYTTMVDYKDCLIVFGGWTYP
SLSQYYQNVTMFNDIHFYCVNTNKWILINTNNPPPPVAGHSACIHDDEMVVFGGLVMSAT
QNFQIQCSNDVWVLDLSSFSWRKQPTTRPRPSPRYAQSLIQLDSDQLLLLGGVQTLQNRF
VYSDCWVLTMKGPIWTWKEIAVRNKEWASANIWCNPACKVGDKVVSLSRSRNGWNSAKPL
VTSAVRLSNFGRAEGAPVSVRVEQSLQRPLDRDQNINGRRGILPRQRVPVNEPIAGPSNE
NDQARIPRAVNEHLNHDYNMAACSGEARQLNNGLDICKKETAYRRNKNKNKGMKIVRQLQ
EANKYRMAAFACDSIGNAPPENDLINQRQIAHLENRLDAPADNQEQRQSNVKKIKRNTLS
MHVLDISTIVGGNSMNYVSWLCPRLGEMRGAPEELVMYSLVKGNGELIMFGGVHNDISIL
NYNEQQNMYSNSLHFITPPRDII