| New model in OGS2.0 | DPOGS200503 |
|---|---|
| Genomic Position | scaffold9040:+ 232-3970 |
| See gene structure | |
| CDS Length | 1221 |
| Paired RNAseq reads | 3282 |
| Single RNAseq reads | 7622 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001725 (0.0) |
| Best Drosophila hit | iron regulatory protein 1B (9e-155) |
| Best Human hit | cytoplasmic aconitate hydratase (6e-143) |
| Best NR hit (blastp) | iron regulatory protein 1 [Manduca sexta] (0.0) |
| Best NR hit (blastx) | iron regulatory protein 1 [Manduca sexta] (0.0) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0005506 iron ion binding GO:0003994 aconitate hydratase activity GO:0006447 regulation of translational initiation by iron GO:0008152 metabolic process GO:0051539 4 iron, 4 sulfur cluster binding GO:0030350 iron-responsive element binding |
| InterPro families | IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 IPR015934 Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase IPR015937 Aconitase/isopropylmalate dehydratase IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha |
| Orthology group | MCL11066 |
Nucleotide sequence:
AATCCATACAGCGGGCTCCTGAAGAAATTGGAAGTTAATAATCAGAGCTTCAGTTACTTT
GACATAACGCAGCTCGGCGCTAAATATGATCGTCTCCCATTTAGCGTGCGCGTTCTCCTC
GAGTCCTGCGTCCGTAACTGCGACAATTTCCAGGTGTTGGAGAAGGATGTGAACAATGTG
CTGGATTGGGAGAAGAACCAGGCCGTCGAGGGTGGAGTGGAAATAGCTTTCAAACCAGCT
CGGGTCATTTTACAGGATCTAACAGGTGTACCAGCTGTTGTGGACTTTGCAGCGATGCGT
CACGCCGTCAAACAGCTGGGCGGTGATCCTGACAGAATAAACCCCATATGTCCAGCTGAC
CTGGTCATAGATCATTCCGTCCAGGTGGATTTTGCAAGAACCCCCGACGCTTTAAACAAA
AACCAAGAGTTGGAGTTTGAACGCAACAAGGAGAGATTCCAGTTTTTGAAGTGGGGCGCT
CAAGCGTTTGACAACATGCTGATAGTTCCACCTGGATCCGGTATAGTTCACCAAGTCAAC
TTGGAGTATCTAGCCCGAGTGGTGTTCACCAAAGATCTTCTGTATCCCGACTCGGTAGTG
GGTACCGATTCTCACACCACCATGATCAATGGCCTGGGGGTCGTTGGCTGGGGTGTTGGA
GGTATTGAAGCAGAGGCGGTGATGTTGGGTCAGGCTATCAGTATGTTGTTGCCAAAAGTG
GTCGGTTACAAGTTGGTTGGTGAATTGAACCCACTAGCGACATCTACCGACTTAGTGTTA
ACTATTACTAAGCACCTCCGTTCCCTGGGCGTGGTTGGTAAATTCGTGGAGTTCTTCGGC
CCGGGCGTGTGTGCTCTCAGTATAGCTGACCGCGCCACCGTAGCCAACATGTGCCCCGAG
TTTGGTGCCACTGTCGCTCACTTCCCTGTGGACGAACGCTCGCTGGACTACCTCAGACAG
ACAAATCGTTCGGATGATAAGATCAAGAAAATTGAGGAATACTTGAAGGCAACTAAACAG
TTTAGAGACTACAGCAATCCCGAGCAGGACCCCGTGTTCTCAGAGGTTGTGGAGTTGGAT
TTGTCAACAGTGGTGACATCTGTGAGCGGGCCCAAGAGACCTCAAGACAGAGTCGCTGTG
AAAGATATGAAGGAAGACTTCAGGGCCTGTCTTAATAATAAGGTAACAAATATATATATA
TATATATATATATATAAGTAA
Protein sequence:
NPYSGLLKKLEVNNQSFSYFDITQLGAKYDRLPFSVRVLLESCVRNCDNFQVLEKDVNNV
LDWEKNQAVEGGVEIAFKPARVILQDLTGVPAVVDFAAMRHAVKQLGGDPDRINPICPAD
LVIDHSVQVDFARTPDALNKNQELEFERNKERFQFLKWGAQAFDNMLIVPPGSGIVHQVN
LEYLARVVFTKDLLYPDSVVGTDSHTTMINGLGVVGWGVGGIEAEAVMLGQAISMLLPKV
VGYKLVGELNPLATSTDLVLTITKHLRSLGVVGKFVEFFGPGVCALSIADRATVANMCPE
FGATVAHFPVDERSLDYLRQTNRSDDKIKKIEEYLKATKQFRDYSNPEQDPVFSEVVELD
LSTVVTSVSGPKRPQDRVAVKDMKEDFRACLNNKVTNIYIYIYIYK