New model in OGS2.0 | DPOGS202205  |
---|---|
Genomic Position | scaffold121:- 17273-19939 |
See gene structure | |
CDS Length | 1335 |
Paired RNAseq reads   | 4825 |
Single RNAseq reads   | 11309 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013499 (0.0) |
Best Drosophila hit   | alien, isoform A (0.0) |
Best Human hit | COP9 signalosome complex subunit 2 isoform 1 (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to cop9 signalosome complex subunit [Nasonia vitripennis] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to cop9 signalosome complex subunit [Nasonia vitripennis] (0.0) |
GeneOntology terms    | GO:0008150 biological_process GO:0005737 cytoplasm GO:0008180 signalosome GO:0005634 nucleus |
InterPro families    | IPR011990 Tetratricopeptide-like helical IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR000717 Proteasome component (PCI) domain IPR013143 PCI/PINT associated module |
Orthology group | MCL14330 |
Nucleotide sequence:
ATGTCCGACCATGACGACGACTATATGTGTGAAGAGGAGGAAGACTATGGCTTGGAATAT
TCGGAGGACAGTAATTCAGAACCCGATGTGGACCTTGAAAACCAGTATTACAATAGCAAA
GCCCTAAAAGAAGACATGCCATTAGCAGCTCTCTTGAGTTTTCAAAAAGTTCTGGAGTTG
GAGGGGGGAGACAAGGGCGAGTGGGGATTCAAGGCTCTCAAACAAATGATTAAGATAAAC
TTTAAACTGAGCAACTTCACGGAAATGATGGCAAGATACAAACAGCTTCTCACATACATC
AAGAGTGCTGTAACAAGAAATCACTCGGAGAAATCAATCAACTCTATCCTTGATTATATT
TCTACTTCTAGAAATATGGAGCTCCTGCAGGATTTTTATGAGACAACATTAGAAGCATTA
AAAGATGCCAAAAATGACCGTTTATGGTTCAAAACAAACACCAAACTAGGCAAGCTGTAT
TATGACCGTGGAGATTTTAATAAATTAGCCAAGATATTGAAGCAATTGCATCAGAGTTGC
CAGACCGATGAGGGCGAAGATGATCTCAAGAAAGGCACCCAACTATTAGAAATATATGCA
CTCGAAATCCAAATGTATACAGCACAAAAAAATAATAAGAAATTAAAGGCACTATATGAA
CAATCGTTGCATATTAAGTCAGCAATACCACATCCCCTCATAATGGGTGTTATAAGAGAG
TGTGGAGGTAAGATGCATCTCAGGGAGGGTGAGTTTGAAAAGGCCCATACAGATTTCTTT
GAAGCTTTCAAGAACTATGACGAATCCGGCAGCCCACGACGAACAACCTGCCTTAAATAT
TTGGTACTAGCCAACATGCTCATGAAGTCCGGCATCAATCCATTTGATTCTCAGGAAGCG
AAACCCTACAAGAACGATCCAGAAATATTAGCAATGACCAACCTTGTGATGGCGTACCAG
AACAACGATATAAATGACTTCGAGTCCATCCTGAAACACAATAGAAACAACATAATGGAT
GATCCCTTCATCAGGGAACACATCGAAGATCTCCTAAGAAATATTAGAACTCAAGTCCTC
ATCAAACTGATCGGTCCGTACACTAGGATCCACATACCGTTCATATCTAAGGAGCTCAAT
ATTGATGAGAAAGAAGTTGAGAATTTATTAGTCACCTGTATTTTGGATAACACCATCAGC
GGTCGCATCGACCAAGTGAACAGCGTGTTGGAGTTAGCCCGTGGTGCGAGGGACGCAGCT
CGGTACACCGCCCTGGACAAGTGGACCGCGCAGTTGGCAGCCCTGCACCTCGCCCTGGCC
AACAAGATGGCCTGA
Protein sequence:
MSDHDDDYMCEEEEDYGLEYSEDSNSEPDVDLENQYYNSKALKEDMPLAALLSFQKVLEL
EGGDKGEWGFKALKQMIKINFKLSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYI
STSRNMELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSC
QTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE
CGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEA
KPYKNDPEILAMTNLVMAYQNNDINDFESILKHNRNNIMDDPFIREHIEDLLRNIRTQVL
IKLIGPYTRIHIPFISKELNIDEKEVENLLVTCILDNTISGRIDQVNSVLELARGARDAA
RYTALDKWTAQLAALHLALANKMA