New model in OGS2.0 | DPOGS214860  |
---|---|
Genomic Position | scaffold809:- 48031-58121 |
See gene structure | |
CDS Length | 1941 |
Paired RNAseq reads   | 412 |
Single RNAseq reads   | 957 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010070 (0.0) |
Best Drosophila hit   | CG6432 (0.0) |
Best Human hit | acyl-CoA synthetase short-chain family member 3, mitochondrial precursor (2e-168) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP001473-PA [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP001473-PA [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0003987 acetate-CoA ligase activity GO:0008152 metabolic process |
InterPro families   | IPR000873 AMP-dependent synthetase/ligase |
Orthology group | MCL13448 |
Nucleotide sequence:
ATGGCTGAAGACGATGGAGCGGTCACTGAAGAATATCAGAAAGCCTATAGAAGTTCCCTT
GAGAACCCTGAGAAGTTCTGGGGAGAGGTGGCCCAAGAGATCGAATGGACACGTCCTTGG
GATCGTGTCTTGGACAACAGCAACCCACCTTTCACCAAATGGTTTGTGGGCGGGGAATTG
TCTGTCTGTTACAATGCTGTAGACCGTCACGTGCCAACCAAAGGTGATCAAATCGCTTTG
GCTTATGACTCCCCTTTGACTGACACCGTCAAGCGCATCACCTACGCCGAACTGCAGGAT
CAGGTATCTCGACTGGCTGGACGACTGTCTTCTCTGGGTGTAGAGCGAGGATCTCGAGTA
CTCATTTATATGCCGCTAATCCCAGAAGCTGTGGTGGCTATGTTGGCTACCAATCGGATA
GGAGCCATACATTCAGTGGTTTTTGGAGGTTTTGCTGCAAGAGAGTTAAGAACAAGAATT
GAACATGCGGAACCAACTGTTATCATAGCAGCGAGCTGTGGAGTGGAACCAAACAAAATA
GTCAGGTACAAAGACATATTGGACGACGCACTATGTCAAAGTTCGCACACGCCTCAGAAG
TGTATAATATACCAAAGACGGCGCGTACTAGAATGTTCCCTGCAGAAGGGAAGAGATATG
TGCTGGGATGAAGCGCTGCAGGCGGAACCTGTTCCGTGTGTTCCAACTGAAGCTAATGAA
GCGTTGTACATATTGTATACATCTGGTACCACGGATGATCCGAAGGGAATCCAACGGCCG
TGTATGCATGCGGCTACGCTGTGTTGGTCAATGCGAGCTGTTTACGGTTTGAAGAGTGGT
GTGTGGTGGGCTGCGTCGGATCTTGGATGGGTGGTCGGTCATTCCTATATATGTTACGGA
CCTCTGCTAGCAGGGCTTACAACCGTTCTGTATGAAGGGAAACCAGATCGAACTCCAGAC
CCTGGACAGTATTATAGGATTATAGAACAACATAGAGTCAACGCTCTCTTTACGATACCA
ACGGCTTTCCGCGTCCTCAAGAGGGCTGACCCCAATGGAAAATATGCTCGAAGATATTGC
CAAAATACATTAAAGACGATATTCATTGCTGGAGAGCATTGTGATCACGAAACCAGACGC
TGGGCTGAAAATATCTTCGGTGTATCTGTTCTGAACCACTGGTGGCAGACAGAGACAGGC
TCCCCCATCACTGCCGCATGTCTTGGATATGGGATGAAAGGGATACGGCCACATTCAACC
GGATATCCTGTGCCTGGATATGATTTACGTGCTCTGAGAGAGGATGGTACTGAATGTAAA
TCGGGAGAAGTTGGTCGTTTGGTTGCAAAACTACCTCTGCCTCCAGGATTCGCTTCAACA
TTGTGGCAATCAGATGAGCGGTTTAAGAAAGTATACTTCGACGCTTATCAGGGTTATTAC
GATACTCAAGATGTTGGTTGGATAAGCGCTGAATCTGCTGTTTGGGTTGTGGCTAGAGCT
GATGACGTCATCAACGTCGCTGGCCACAGGCTCTCGACAGCCGCCATCGAAGATGTCGTT
CTGAAGCACGCCAGGGTTGCGGATGCAGTGGTCGTCGGAGCCCCCGACCCGACTAAAGGG
GATGTCCCTCTTTGCTTATACGTCATGCGTCCTCCGCAAGACGACGAAGAAATGGTGACG
GAGAGCACGGTCACACAAGAGCTGATAGCGTTGGTGCGACACTTGATTGGACCGATTGCA
GCCTTTCGGAAGGCTGTAGCTGTACCAGCACTGCCTCGCACACGATCTGGAAAGGCTTTG
AGAGGAGCTATATCGAGACTGGCCAGGTGCCAGCAGATTAAGCTACCGGCTACCATCGAA
GATCCAAGCGTGTTCGGCGAAATAAAGGTCGCATTGCAAAAATTTGGATACGCCATTGAT
GCACCGGACCCTGAAATGTAA
Protein sequence:
MAEDDGAVTEEYQKAYRSSLENPEKFWGEVAQEIEWTRPWDRVLDNSNPPFTKWFVGGEL
SVCYNAVDRHVPTKGDQIALAYDSPLTDTVKRITYAELQDQVSRLAGRLSSLGVERGSRV
LIYMPLIPEAVVAMLATNRIGAIHSVVFGGFAARELRTRIEHAEPTVIIAASCGVEPNKI
VRYKDILDDALCQSSHTPQKCIIYQRRRVLECSLQKGRDMCWDEALQAEPVPCVPTEANE
ALYILYTSGTTDDPKGIQRPCMHAATLCWSMRAVYGLKSGVWWAASDLGWVVGHSYICYG
PLLAGLTTVLYEGKPDRTPDPGQYYRIIEQHRVNALFTIPTAFRVLKRADPNGKYARRYC
QNTLKTIFIAGEHCDHETRRWAENIFGVSVLNHWWQTETGSPITAACLGYGMKGIRPHST
GYPVPGYDLRALREDGTECKSGEVGRLVAKLPLPPGFASTLWQSDERFKKVYFDAYQGYY
DTQDVGWISAESAVWVVARADDVINVAGHRLSTAAIEDVVLKHARVADAVVVGAPDPTKG
DVPLCLYVMRPPQDDEEMVTESTVTQELIALVRHLIGPIAAFRKAVAVPALPRTRSGKAL
RGAISRLARCQQIKLPATIEDPSVFGEIKVALQKFGYAIDAPDPEM