| New model in OGS2.0 | DPOGS214861 |
|---|---|
| Genomic Position | scaffold809:- 40608-44914 |
| See gene structure | |
| CDS Length | 1530 |
| Paired RNAseq reads | 1918 |
| Single RNAseq reads | 4791 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010072 (1e-73) |
| Best Drosophila hit | cortactin (5e-72) |
| Best Human hit | src substrate cortactin isoform b (2e-94) |
| Best NR hit (blastp) | PREDICTED: cortactin [Taeniopygia guttata] (3e-127) |
| Best NR hit (blastx) | PREDICTED: cortactin [Taeniopygia guttata] (4e-126) |
| GeneOntology terms | GO:0001726 ruffle GO:0005515 protein binding GO:0005737 cytoplasm GO:0005938 cell cortex GO:0006898 receptor-mediated endocytosis GO:0030027 lamellipodium |
| InterPro families | IPR015503 Cortactin IPR001452 Src homology-3 domain IPR003134 Hs1/Cortactin IPR000108 Neutrophil cytosol factor 2 p67phox |
| Orthology group | MCL17978 |
Nucleotide sequence:
ATGTGGAAAGCGGCCACTGATGTAGTGGCGCCCACACCGGCCGAGGCTGACGATTGGGAG
ACAGATCCCGACTTTGTGAATGATGTCACAGAACAGGAACAACGTTGGGGGCCAGGGGGA
AGACATGTAGAAGCTATTGATATGGCTAAACTCAGAGAGGAAGTTCTGGAAGCAGACAAG
CAAATTAAACAGAAGCAGTACGAGGAAGGGCCTAAACCCTCATATGGATATGGAGGGAAA
TTTGGTGTCCAACAAGACAGGATGGATAAATCAGCGGTCGGGCACGATTACGTCGGCAAA
ACAGAGAAGCATGTCTCGCAGAAAGATTACGCACAAGGTTTCGGCGGTAAGTTTGGCGTT
CAAACTGACCGTATGGACGCCAGCGCGGTGGGTCACGACTATGTGGGCGTCGTGTCCAAG
CACGCCTCGCAGACCGATCATAGTAGGGGCTTCGGGGGGAAGTACGGCGTGCAGACTGAC
AGAGTTGACAAGAGCGCGGCTGGTTGGGAACACAAGGAGCAGATAGAGAAGCATCCGTCG
CAGAAAGACTACTCGGTCGGCTTCGGAGGCAAGTTCGGTGTACAGGTCGACCGGCAGGAC
GCCAGCGCCGCCGACTGGGGACACAAGGAACCCACTGCGGCACACGAGTCGCAGACTGAT
CACTCCCGCGGTTTCGGTGGTAAGTTCGGGGTGCAGACGGACAGACAGGACGCGTCCGCC
GTCGGCTGGGATCACCAGGAGAAGACGGAGGCTCACGCTAGCCAAGTGGACCATAAGAAG
GGCTTCGGTGGTAAATTCGGTGTCCAAACTGACAGAGTGGATAAATGCGCCCAAGGTTTC
GACTCCGTGGAGAAGTCGGGCGGGTACAGTAGACCCAGGCCAGACATCGGCGGAGCCAAG
CCCAGCTCCATACGAGCCAAGTTTGAGAACATGGCCAAGGAAAAAGAACAGATCCTTCGA
GATCAATCCGTTCAGAAATTAAGACAGGAGAGGCAACAACTAGATCGTAGTTTGTCAGAA
AAAGAAAAACAACGTCTGGAGAAAGAAAAGGAGCAAAATCAAGAAGAGACGGCCAGCACG
AACGTGTTCAAGAAGACTGAAGGTGGTAACGCAGTGCCCGCGGCTGTGCAGGCTGTGCAG
GACGCGAGACAAGAGGTGGAGCAGGACGTTAGACAGGACTCTGTGCACGAGAAACAGGAA
GTGAAGCAGAGCAACCTGCCGGATGTGACTCTTGTGGGAGACGCCAAGGACGAAGACAAG
GAAGAGCATCCGCGGCAGCCCACGATAGTGGTGTCTCCTGTGGGCTGGGAGGGGGAGGGC
GAGGGCGAGGCGTGCGAGGCTGACGACGAGGACGGGTACACGGCCCGCGCGCTGTACGAC
TACCAGGCCGCGGCGCCCGACGAAATATCATTCGACCCCGACGACCTCATCACCAACATC
GTCATGATCGACGAGGGCTGGTGGCAGGGTCTGTGTAAGGGCGCATACGGCCTGTTCCCG
GCTAACTACGTACAGCTACAAGACAAATAA
Protein sequence:
MWKAATDVVAPTPAEADDWETDPDFVNDVTEQEQRWGPGGRHVEAIDMAKLREEVLEADK
QIKQKQYEEGPKPSYGYGGKFGVQQDRMDKSAVGHDYVGKTEKHVSQKDYAQGFGGKFGV
QTDRMDASAVGHDYVGVVSKHASQTDHSRGFGGKYGVQTDRVDKSAAGWEHKEQIEKHPS
QKDYSVGFGGKFGVQVDRQDASAADWGHKEPTAAHESQTDHSRGFGGKFGVQTDRQDASA
VGWDHQEKTEAHASQVDHKKGFGGKFGVQTDRVDKCAQGFDSVEKSGGYSRPRPDIGGAK
PSSIRAKFENMAKEKEQILRDQSVQKLRQERQQLDRSLSEKEKQRLEKEKEQNQEETAST
NVFKKTEGGNAVPAAVQAVQDARQEVEQDVRQDSVHEKQEVKQSNLPDVTLVGDAKDEDK
EEHPRQPTIVVSPVGWEGEGEGEACEADDEDGYTARALYDYQAAAPDEISFDPDDLITNI
VMIDEGWWQGLCKGAYGLFPANYVQLQDK