DPGLEAN20225 in OGS1.0

New model in OGS2.0DPOGS215413 
Genomic Positionscaffold211:- 12988-16798
See gene structure
CDS Length1830
Paired RNAseq reads  330
Single RNAseq reads  956
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA012374 (0.0)
Best Drosophila hit  ninaG (4e-68)
Best Human hitcholine dehydrogenase, mitochondrial precursor (4e-35)
Best NR hit (blastp)  PREDICTED: similar to ENSANGP00000029571 [Nasonia vitripennis] (3e-123)
Best NR hit (blastx)  PREDICTED: similar to ENSANGP00000029571 [Nasonia vitripennis] (7e-96)
GeneOntology terms







  
GO:0005575 cellular_component
GO:0050660 FAD binding
GO:0006066 alcohol metabolic process
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0046154 rhodopsin metabolic process
GO:0007601 visual perception
GO:0001523 retinoid metabolic process
GO:0006810 transport
GO:0016491 oxidoreductase activity
InterPro families

  
IPR012132 Glucose-methanol-choline oxidoreductase
IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal
IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal
Orthology groupMCL17447

Nucleotide sequence:

ATGACACTGTATACATTATTTGTTAGTGTTTTAGTTGTATGCGTGTCTTATCTCGTGTAT
CAAAAATACTCCAACGTAAATGTCAGCTTTGTACAGAAACCCGAAAAGCGATATGATTAC
ATCATTGTCGGCGCCGGCACCGCTGGTTGCGTTCTGGCTTCCCGACTATCTGAAGATCCA
AACGTCAAAGTGTTACTTATTGAAGCTGGAGACCACATGGGTTATTTCACTAAAATACCG
CTGACCTCAACTGCCGCACAGCTAGGACCTAATGATTGGTCTGTACGAACTACGCCACAG
AAATATTCCTCCTTTGGGCTCATTGATCGGACCCAAATAATCCCACGCGGGAGAGGTCCA
GGAGGATCTGGACAGATAAATTTCCTGCTTCACGGATTTGGTTTACCCGAGGATTACAAT
CGTTGGTCCCGCTTGGGCTTTAAGGGGTGGACGTTGGAAAACTTAAAACCATATTTCATT
AAAGCTTTCGGGACCTACAAAAGCGAATTCGACTCAGATATGTGTCCACCCAAAGGACAA
TGTTCGGAGGCTCCGATGAAGCTGAAATTGATCGATGACAGTAACGAACTGATGACCATC
TTCAAACAAGCCTCCTTGAGTCTCTCTGACAAAACAACACTGTTTAGAAGAGCCACGGCG
TCCATTAAGGGAGGATCAAGATATCAGACATACAGCGCCTATTTAAAACCAGCACTCAAA
AGACCAAATCTACATGTCCTACTTAAAACACAGGCAATATCAATACGTTTTGAGGATCAG
AAAGTTTCGTCTCTTTACATTTTGGAAGACCATCGAAATCTGGACAATATATTTGTAAAC
AAAGAAATAATACTTAGCGCCGGTTCCATTAAAACACCACAAATCTTAATGCTGTCTGGT
ATAGGACCAAGGAATTTAATGAGAAGGCTAAGGCTAGAATTGGTATCAGACAATGAGTTC
GTGGGTCGCAACCTGCACGATCATCTTAATGTGCCTATCTATGTCAGCATAAAAAAACCT
ATCAGTATTACTTTAGCCAAGGTATTTAGTGCCAGTACCCTTTGGAATTACTTTTGGAAC
GGAGACGGTTATTTAGCTTTTCCTCCTGTAGCTGGTGTGGAATATCGTAACTCTTCAGCT
CTGATGCTGTTCTCAATGGGATCTTCCAGTGAGAGATTGTTACGAGACTTGTCCAACTAT
AAACCTCAGGTTTTCCGTGAAACATTTCCGTTCCACAACGACACCAGTAAAGAAGGCTTC
ATGTGGCTGGCGTCCTGTGTGGCACCTCGGAGTCGTGGTCAAGTTACAGTCACGGACCCG
AGCACTAGTGTTCCGCCGGAAGTTGACCCCAACTACCTTCATCGAGAATATGATGTACGA
TGCATTATTAGAGCGATCAGACGAGCGGAAAGATTGGTATCGACAAAATCATTCCGAAGT
ATCGGAGCGAAAATCCACTGGCCGAGATCAGAGCGCTGCTTACCGTTGTGGACCTACACG
AAGTTGGAGCAACTCGGACTGAGGCGAAGAAAGAAGATAAAAGTACCAGGAGAGAAGCCA
CGCAAGGAGATACCAAAGCAGAAGCCTCGGAGTCCCCCTGACGCATACCTGGAGTGTATC
ATCCGGGAGGTAGGAGTGACGGGACACCACGCGGGGGGAACGTGCGCCGGGGGAAGGGTT
GTCGACGATCTACTCCGTGTCAAAGACGTCGAAGGTCTCCGTATAATGGACGCGAGTGTT
TTTCCCGCGCCAACATCGCTGTATCCAAACTCAGTAATAGTCGCGATGGCGGAAAAAGCA
GCAGACTTAATAAGGAATACTGTAACGTAG

Protein sequence:

MTLYTLFVSVLVVCVSYLVYQKYSNVNVSFVQKPEKRYDYIIVGAGTAGCVLASRLSEDP
NVKVLLIEAGDHMGYFTKIPLTSTAAQLGPNDWSVRTTPQKYSSFGLIDRTQIIPRGRGP
GGSGQINFLLHGFGLPEDYNRWSRLGFKGWTLENLKPYFIKAFGTYKSEFDSDMCPPKGQ
CSEAPMKLKLIDDSNELMTIFKQASLSLSDKTTLFRRATASIKGGSRYQTYSAYLKPALK
RPNLHVLLKTQAISIRFEDQKVSSLYILEDHRNLDNIFVNKEIILSAGSIKTPQILMLSG
IGPRNLMRRLRLELVSDNEFVGRNLHDHLNVPIYVSIKKPISITLAKVFSASTLWNYFWN
GDGYLAFPPVAGVEYRNSSALMLFSMGSSSERLLRDLSNYKPQVFRETFPFHNDTSKEGF
MWLASCVAPRSRGQVTVTDPSTSVPPEVDPNYLHREYDVRCIIRAIRRAERLVSTKSFRS
IGAKIHWPRSERCLPLWTYTKLEQLGLRRRKKIKVPGEKPRKEIPKQKPRSPPDAYLECI
IREVGVTGHHAGGTCAGGRVVDDLLRVKDVEGLRIMDASVFPAPTSLYPNSVIVAMAEKA
ADLIRNTVT