New model in OGS2.0 | DPOGS215414  |
---|---|
Genomic Position | scaffold211:- 8778-11447 |
See gene structure | |
CDS Length | 1512 |
Paired RNAseq reads   | 6 |
Single RNAseq reads   | 39 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012375 (1e-52) |
Best Drosophila hit   | CG7675, isoform B (5e-32) |
Best Human hit | retinol dehydrogenase 11 (7e-33) |
Best NR hit (blastp)   | hypothetical protein BRAFLDRAFT_118764 [Branchiostoma floridae] (1e-69) |
Best NR hit (blastx)   | GH21883 [Drosophila grimshawi] (2e-60) |
GeneOntology terms    | GO:0005488 binding GO:0016491 oxidoreductase activity GO:0055114 oxidation reduction |
InterPro families    | IPR016040 NAD(P)-binding domain IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR |
Orthology group | MCL40745 |
Nucleotide sequence:
ATGCGGGCTAGAGACAAAATAGAAAAGATATCAGGGAACAGAAATGTGTCTTACAAGCTT
TTGGACTTAGCTTCTTTGACATCAGTGAGGAGTTTTGTAAGCGACACCATCAACACTGAA
GAAAGGTTAGACATTTTAGTCAACAATGCTGGGGCTGTGGGACTCCCTGACAGATTGACG
GAAGATGGCCTTAATCTTACCATGCAAGTAAATTTTTTTGGTACATTCCTACTGACGTAT
CTATTGCTGCCTCTGTTAAAAAGTTCAGCACCGAGTCGAATAATAAACAGTTCAGCGTCG
TCGATGTACGTCGGACATATCGACTTCGAACAGTGGAATGATATTGAACGATACACTCCC
ATAGAGGTACTGGCCAACTCAAAACTAGCAGTGACTCTGTTTAGCGCAGAATTAAGTGCA
AGGCTAAAAGAATACGGGGTGTCTGTGAACACTTACGATCCCTTTGTTGTTAAAGATACT
GATATATTGGATAATCTTCCAAGCTTATTAAAAAATATAACCCAGCTCTTTGTGGATATT
GTTGGACAACCCAAGGAAGACGTTGGAAGAGAAATCGCTTACTTAGCATCCGATCCACAG
TTTGAAAAAGACGACTTCGCAAACTGTGAAAACAATGTTCGTATGGATGGACAAGTGGCC
ATCGTTACTGGAGCTACTGCCGGTATAGGGTTTGAAGTTGCCAAAAATTTTGCGAAAAGA
GGAGCCAGAGTCATAATAGGCAGCAGGAACCCTGCTAAAATGGATAAAGCAAAAAACGCA
ATCATACAAAGCTCTGGAAATACGAACATTTCAACCAGAAAACTCGACTTCGCCTCTTTA
AAATCTATACGAAGGTTCGCAAGTGCAATATATATGAGTGAACCCAAATTAAACATACTA
ATCAACAACATCGGCGCCCTCGGCTTACCAGATCGACTGACGAAGGACAAACTTAATCTG
ATGATGCAAGTTAACTACTTTGGGGCCTTCCTGCTAACCTTCTTGCTATTGCCTTTATTA
AGGACTTCAGCCCCGAGTAGGATCGTGAATGTGTCGTCTATAACTCTACTTCTGGGTCAC
ATTGAACTCGATCATATGAACGATGTTGGAAGATTTTCAAGCTTCGGAATGTATTGCAAC
TCAAAGTTAGCAGATATATTGTTTACTGTTGAAATGAACAAACGGATACGAGGCAGTGGC
GTTAACGTGTACAGTATGGACCCCGGGCTGAGTAAGTCTGAGTTCTTCAGAGATTTTAAC
GACACAACCTTAAGAAATGTTTTTAATGCAGGCATGTTGTTATTGGGACGCGATTTAGAT
AGGGTTGCTACAATGCCAGTGTTTTTAGCGACAGATCCGAGGGTCCAAAATTCGAGCGGT
AAGCATTTCAGAGACTGCGCTGAATTCTACAGTTCGTGGTTTGCTGAAGACGCTGACTTA
ACTCGGAAACTGTGGGAGGAATCAAAACGATTAGTAAACATCACCACTCAAGAGGACTGG
GAACTTAAATAG
Protein sequence:
MRARDKIEKISGNRNVSYKLLDLASLTSVRSFVSDTINTEERLDILVNNAGAVGLPDRLT
EDGLNLTMQVNFFGTFLLTYLLLPLLKSSAPSRIINSSASSMYVGHIDFEQWNDIERYTP
IEVLANSKLAVTLFSAELSARLKEYGVSVNTYDPFVVKDTDILDNLPSLLKNITQLFVDI
VGQPKEDVGREIAYLASDPQFEKDDFANCENNVRMDGQVAIVTGATAGIGFEVAKNFAKR
GARVIIGSRNPAKMDKAKNAIIQSSGNTNISTRKLDFASLKSIRRFASAIYMSEPKLNIL
INNIGALGLPDRLTKDKLNLMMQVNYFGAFLLTFLLLPLLRTSAPSRIVNVSSITLLLGH
IELDHMNDVGRFSSFGMYCNSKLADILFTVEMNKRIRGSGVNVYSMDPGLSKSEFFRDFN
DTTLRNVFNAGMLLLGRDLDRVATMPVFLATDPRVQNSSGKHFRDCAEFYSSWFAEDADL
TRKLWEESKRLVNITTQEDWELK