| New model in OGS2.0 | DPOGS203178 |
|---|---|
| Genomic Position | scaffold72:- 8554-12394 |
| See gene structure | |
| CDS Length | 1998 |
| Paired RNAseq reads | 171 |
| Single RNAseq reads | 530 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014395 (7e-55) |
| Best Drosophila hit | ND |
| Best Human hit | piggyBac transposable element-derived protein 3 (1e-36) |
| Best NR hit (blastp) | PREDICTED: similar to hCG32740, partial [Hydra magnipapillata] (1e-70) |
| Best NR hit (blastx) | PREDICTED: similar to hCG32740 [Hydra magnipapillata] (2e-67) |
| GeneOntology terms | GO:0005044 scavenger receptor activity GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0016020 membrane |
| InterPro families | ND |
| Orthology group | MCL10014 |
Nucleotide sequence:
ATGGCTTCGAAACAACAAAGTGTTGGCGGGACCCGGAACTTACAACTAACTCGCGCCCAT
AAGATCTTGGCTTTGGTACCCGCTCAAAACGCATGCTCTGACGATAGTTCCACATCTGAT
GAGGAAGCAAATGCTTATATACCGCCTTCACCAGATACCTCTGATCCACCTTCAATAGCA
TCATCACTATTAGCATCATCACTAGAAGCCCTTAATTTGCTTGATACTTCAACTGACTCC
AAAAACGAACAGCATGATATACCCATTACTTTACCACTCACACCAACATTTGATGAAGTT
TTTCCATCGCCGAATACAAGTAACTACAATGTTATACCCACATTGAACTCCATCCAATCT
TTGCCATCTCCTTCTGTTGAACTATCATCTCCCCAGCCTAGCACCAGCGGACAGCAGTTA
CTACTTACCAGGTCCAAGCGTAAAAAGACAACAAAGACTGTAGTGACCAAAAAAGTAAAG
GTTCAGAAATTCGCCCTAAATTATCAATGGTTAAAAGCAGTATTTCGTCACAATGTATCT
CTTGAAGAAAACTTATACAATCTCCATCAAACACAAATAGAGACAGTACTGGATTATTTT
TATTTCTTTTTTTCTCCTGACTTAATTACTGACATTGTTTATAATACAAATTTATATGCA
GTTGAACAACTAGGTCGATCTATTCAGCTGACAGAAGATGAGATTAAAAGCTTCCTGGCC
ATTCAAATCATGATGGGTATAGTACAGATGCCAGCTTATACTGACTATTGGGCAAGAAAA
ACAAGATACCCTCTCATTGCTGATCTTATGCCTCTCAAAAAGTATCAACAAATACGTCGA
TATATTCATTTTGTTGATAATACTTTGCAAGATTCAGACCGTTATTTCAAGATTCGCCCC
CTAATGGAGAAAATACGCAAAAATTTTCTGAAAATTGAAGAAGAAGGAAAATATTCCATT
GACGAGATGATGATACCTTATAAAGGTCGTAAAGCAGGTAAACGAAAGCAGTACATAAAA
ATGAAACCTAAGAAATGGGGGTTTAAGAATTTTGTCCGTGCGGGTGTTTCGGGTATCATC
TACGATTTTATTCTGTATGGTGGCGACGATACCTTTCGTGGACTGACTTTTTCAGAGAAA
GAAGCTACAATTGGTTTAGGAGGTATGGTAGTGCTTGCATTGTGTCAAACTATAAAGAAA
AAGCCGGCCATTGTGTATGCTGATAACTTTTTTATGTCGCCTGAACTAACATATATTCTG
CGGGAAGAATACGGGATCCTTAGTCTAGGAACAATAAGGACTAATCGTCTCAGAGGCTGT
CAAGAGTTATTGCCAACTGACAAACAATTAAAAAAGAAGAAACGCGGTTCTAGCGCCCAG
GTGGTTTGCAATAAGAATAAGTTGGCAGTCGTAAAGTGGAACGACAATAAAGTGGTTACA
CTTATTAGCACCTACATAGACTCGTACCCCTTAGAAACAATCAAACGATACGATAAGGAT
GAGAAAAAGAAAGTAGATGTAGAATGTCCTCAAGTGGTCAAACATTACAACAAACATATG
GGAGGGGTCGATTTAGCAGATATGTTGATATCGTTATATAGAACTCCCTTCAAAAGTCAC
CGTTGGTACTTGGGAATATTTTCACAACTTGTTGATATGTGTATAAATAACGCTTGGCTC
CTACATAGAAGAGATGGGAAGAAGACTTCATTGAAAGATTTCAGATTTGAATTGTTTGAT
GGGTTGTCTAAGTCTAATAGAATAGGAACAAACCAAAACGTTACAGACGATATAGGCGAG
AATCTGAAAATCCATAAACCAGTCTCAGTCCGACCAACTGATAGCGTCAGATTTGATAAC
ACAGGTCATCTTCCAGAAGCAGGTTGTCACCATAGCCACGTCCTGCAAACTTTTCGTCTA
GATGACAGCGTTATCTGCCAATCGTACATGTGGGAGACACTGGCAAACAGATCACTATGC
CTTAGGGACATAGAATAA
Protein sequence:
MASKQQSVGGTRNLQLTRAHKILALVPAQNACSDDSSTSDEEANAYIPPSPDTSDPPSIA
SSLLASSLEALNLLDTSTDSKNEQHDIPITLPLTPTFDEVFPSPNTSNYNVIPTLNSIQS
LPSPSVELSSPQPSTSGQQLLLTRSKRKKTTKTVVTKKVKVQKFALNYQWLKAVFRHNVS
LEENLYNLHQTQIETVLDYFYFFFSPDLITDIVYNTNLYAVEQLGRSIQLTEDEIKSFLA
IQIMMGIVQMPAYTDYWARKTRYPLIADLMPLKKYQQIRRYIHFVDNTLQDSDRYFKIRP
LMEKIRKNFLKIEEEGKYSIDEMMIPYKGRKAGKRKQYIKMKPKKWGFKNFVRAGVSGII
YDFILYGGDDTFRGLTFSEKEATIGLGGMVVLALCQTIKKKPAIVYADNFFMSPELTYIL
REEYGILSLGTIRTNRLRGCQELLPTDKQLKKKKRGSSAQVVCNKNKLAVVKWNDNKVVT
LISTYIDSYPLETIKRYDKDEKKKVDVECPQVVKHYNKHMGGVDLADMLISLYRTPFKSH
RWYLGIFSQLVDMCINNAWLLHRRDGKKTSLKDFRFELFDGLSKSNRIGTNQNVTDDIGE
NLKIHKPVSVRPTDSVRFDNTGHLPEAGCHHSHVLQTFRLDDSVICQSYMWETLANRSLC
LRDIE